Sclerotinia sclerotiorum: SS1G_14344
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Entry
SS1G_14344 CDS
T01071
Name
(RefSeq) 90S preribosome component RRP12
KO
K14794
ribosomal RNA-processing protein 12
Organism
ssl
Sclerotinia sclerotiorum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssl03009
]
SS1G_14344
Ribosome biogenesis [BR:
ssl03009
]
Eukaryotic type
90S particles
Other 90S particles
SS1G_14344
Pre-60S particles
Other pre-60S particles
SS1G_14344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
RESC10
XRN_M
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
5480769
NCBI-ProteinID:
XP_001584731
UniProt:
A7F9R3
A0A1D9QN14
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MSLQEKLDKIRSPKLQNQHQTAIVLSAVEDTLKDQKTEATPTGYFAALLALLRQACPQNG
EVNKDLTTSVVYLLDIITPFTPQPLLRSKFSQILENLAPAFVLPEADAPLLRPSIGCLES
LLSAQDSAAWELSVNVTGPRRAIAGLLNFAVDHRPKIRKRAQEALANVLKNPPPSPSLDH
PAADMCAETALRSLSDLAAQSHQARKQRKASATAEHEPALIHALQLVKTIAGASGGWPSK
KIEALCEVLLNISKSSNEYLAMTSFEVFEMIFESMANETATSKLPRLLEVISELRPSQND
SQLLPPWIAVLSRGYDVSAQLEPEETFAKLPELFTMISGFMSSSSHSIRVSSSECLISLM
ANCVPESVIAEPSIFDEKVLEKLAKCAVDLLSVKYQAAWMETFNVMGSMFDALRWRADPI
LSEVVRTIGELRGSESFAGKKEADEILGKAIRAMGPERVLSILPLNLAKPKAGQPGRAWM
LPILRDYVSNTNLQHFRTELEPLSQAMLQRVSEHGAAEKTMDIKIFETIVKQIWAILPGY
CDLPLDLTEAFDIKFAEILVNILYGQVDLRSDICRALQTLVESNQAILAIEGEEDLLLQS
RVAKAVAQKNIEHLATFASNMLSVLFNVYNETLPQFRGYILQCINAFLSITPAQELMETF
ERVSQALGTSLAEAGAQTQAEKQKQRQQNAANKMPPTSHSLMDLVITISIYLPRDSFSTL
FNMAALIIVKDDDPQLQKKAYKLIPRLAESETGKAALQERSTDLQELLLNSAEKVSTPAK
RDRLAAISVLIPFLPADSLHFIPAILSEVVISCKETNERARTTAFDLLILMGEKIASSSG
ATIDNSKVSHMPNDAPSVTATLEEYFTMVSAGLAGSTPHMVSASITALTRILYNFRESLS
PETVSDLVQTMDLFLTSNNREIVRSVLGFVKVCVISLPSSLVLPRLESLIPNLMVWSHEH
KAHFKAKVKHILERMIRRFGVEIVNKYCPEEDKKLITNIRKTRERRKRNKDAAKEAGEDS
DDGETGGKRRNKFENEYDEALHGSDSESSGSDVSDDEVLGKSRKKGGKKAAGGNTYIVED
DDEPLDLLDRKALGNISSTKPVKARTITRTKAKMDLDGKLLLGGNDSDDDDQMVIDTPAE
EDGGVGAYVHALKGRDAPKKGRGGRLKFSNRKGQDEDDEMDVDEDELKTVKKSIGGDRDR
NSRGRGRGGRGGDRGRGGGRGGFNSGRRGLGEEKRSGGGGGGGGGRVMKSPRGRGRGNGH
GRR
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgtctttacaagagaagctcgacaagatccgttcgccgaagcttcaaaatcaacatcag
actgcaattgtattgtctgccgttgaagatacacttaaagatcagaaaacagaagccact
ccaactggatattttgcggcattattggcacttctgagacaagcgtgccctcaaaatgga
gaagttaacaaagatttaactacttctgttgtatatttactcgacattatcacacctttt
acccctcaaccacttctccgatcaaagttctcccaaatcctcgaaaatcttgcccccgcc
ttcgtattaccagaagcagatgctcctctcctcagaccttcgataggatgcctcgaatca
ttattatccgcgcaagattccgcagcatgggaactttcagtcaacgtaactggaccaaga
agggcgattgctggattattgaatttcgccgtggatcacagacctaagattagaaagcgt
gcgcaagaagcattggcaaatgttttgaaaaatcctccgccgagtccatccctcgatcat
cctgcggcggatatgtgtgcggagactgctttgagaagtttaagtgaccttgcggcccaa
tcgcatcaagccaggaaacagaggaaagcaagcgcaactgcagaacatgaaccagctttg
attcacgcattacaattagtgaagactatcgcgggagcatctggaggatggccgagtaag
aaaattgaggcgttgtgcgaggttttattgaatatttcgaaatcaagcaatgaatatttg
gccatgacttcgttcgaagtatttgagatgatatttgagagtatggcaaacgagactgcg
acatcgaagttacctcgacttttagaagttatctctgagttgagaccttctcaaaacgat
tctcaacttctccccccttggatcgctgtgttatcgcggggttatgatgtttctgcgcaa
ctcgagccagaggagacttttgcaaaattacctgaacttttcaccatgatctccggattt
atgtcatcttcatcgcacagcattcgggtatcttcatcagaatgtctaatctcattaatg
gccaactgtgtcccagaatcggttattgcggagccttccatatttgacgagaaagtcctc
gagaagttggcaaaatgtgcagtggatcttttgagtgttaaatatcaagctgcttggatg
gaaacgttcaatgttatgggttccatgtttgacgctttgagatggagagcagatccgatc
ttgtctgaagtggttagaacaattggtgagctgagaggtagcgagtctttcgctggcaaa
aaggaagcggatgaaatccttggaaaagctatcagagctatgggaccagaacgagttctc
agcatcttacctctcaacctcgctaaaccaaaggctggacaacctggacgagcctggatg
ttgccgatcctacgagactatgtcagtaatacgaatctccaacatttccgaactgaactt
gagccattgagccaagcaatgttacaacgggtcagtgagcatggagccgccgaaaagacg
atggatatcaagattttcgagactattgtgaagcaaatctgggctattcttcccggttac
tgtgacctcccattggatctcactgaagcatttgatatcaagttcgcagaaatacttgta
aacattttgtacgggcaagttgatctacgttcagatatttgcagagctttacagacttta
gtagagtctaaccaggcgatcctcgccattgaaggagaggaagacttactcctccagagt
cgtgttgcgaaggctgtggcacagaagaacattgagcatttggctaccttcgccagtaat
atgctctctgttttgtttaacgtttacaatgaaacattgccacagttcagaggttacatc
ttgcaatgtatcaatgcgttccttagcattacacctgctcaagaacttatggagacattc
gaacgagttagtcaagcattgggaacatccctcgccgaagccggtgctcaaacccaagca
gaaaagcagaaacaaaggcaacaaaatgcggctaacaagatgccaccaacgagtcacagt
ctcatggatttggtcattacgatctcaatttacttgccaagagatagtttcagcactcta
ttcaacatggcagctcttatcattgtaaaagatgacgaccctcaacttcagaagaaggct
tataagcttattcctcgacttgccgagtcggaaactggcaaggcggcactgcaagaacgt
agcactgatcttcaagaacttctgttgaacagtgccgagaaagtatctacaccagcaaaa
cgcgatcgtcttgccgcaatctctgttcttattcctttcctcccagccgactctcttcat
ttcatcccagcaattctatccgaggtcgtcatctcgtgcaaggaaacaaatgagcgtgct
cgtactacagcgttcgacctcctcattttgatgggagagaagatcgcttcgtcgtccggt
gctacaatcgacaacagcaaagtatcccatatgcccaatgatgcaccatctgtaaccgcc
accctcgaggaatatttcaccatggtcagtgccggtctcgccggtagcacaccccacatg
gtatccgcatctatcacagctcttactcgtatcctctacaacttccgcgagtctctatct
cccgaaaccgttagcgaccttgtgcaaactatggatctcttcctcacatccaacaaccgt
gaaatcgttcgtagcgtccttggattcgtaaaagtttgcgtcatctccttgccttcttcc
cttgtgcttcctcgtcttgaaagtctcattcctaatctgatggtctggagtcatgagcat
aaggctcatttcaaggcaaaggttaagcacattctcgaacgcatgattcgtcgtttcggc
gttgagattgtcaataaatattgtccggaggaagacaaaaagctcatcaccaatatccgc
aagacccgcgagagaagaaagagaaataaggatgcggctaaggaagcgggtgaagatagt
gacgatggagaaactggtggaaagagaagaaacaaattcgaaaacgaatatgatgaggct
cttcatggcagtgactctgaatcatctggttcggatgtatcagacgatgaagtcctgggt
aaatctcgaaagaagggcggtaagaaggctgcaggcgggaacacatatatcgtggaagat
gacgatgaaccccttgatttgcttgatcgtaaagcacttggcaatatctcatctaccaaa
cccgtaaaagcgcgaacgatcacgagaaccaaagcaaagatggatctggatggaaaattg
ttgctgggaggtaatgatagtgatgatgatgatcaaatggttatcgatacgccggcggaa
gaagatggtggtgtgggtgcctatgttcatgcattgaagggaagagatgcgccaaagaag
ggtagaggcggaagacttaagtttagtaatcgaaagggtcaggatgaggatgatgagatg
gatgttgatgaggatgagttgaaaacagtcaagaagagtattggtggtgatagggacagg
aatagtaggggaagagggaggggtggaagaggtggcgatagggggagaggtggtggaaga
ggaggtttcaatagtggaaggagaggtttgggtgaggagaagagatctggtggtggtgga
ggaggtggcggtggaagggtgatgaagagtccgaggggacgtggaaggggcaacggtcat
gggaggagatag
DBGET
integrated database retrieval system
