Streptomyces solicathayae: R2D22_03750
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Entry
R2D22_03750 CDS
T11073
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ssli Streptomyces solicathayae
Pathway
ssli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R2D22_03750 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssli03019
]
R2D22_03750 (recQ)
03400 DNA repair and recombination proteins [BR:
ssli03400
]
R2D22_03750 (recQ)
Enzymes [BR:
ssli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R2D22_03750 (recQ)
Messenger RNA biogenesis [BR:
ssli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R2D22_03750 (recQ)
DNA repair and recombination proteins [BR:
ssli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
R2D22_03750 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
WOX20551
LinkDB
All DBs
Position
complement(779293..781278)
Genome browser
AA seq
661 aa
AA seq
DB search
MALTDASPETSDALRVLHRVFGYDSFRGEQQEIIEQVVAGGDALVLMPTGGGKSLCYQIP
ALVRDGTGVVISPLIALMQDQVDALTALGVRAGFLNSTQAPHERQAVEQAFLADELDLLY
LAPERLRTEGTQRLLDRGKVSLFAIDEAHCVAQWGHDFRPDYLALSMLHERWPKVPRIAL
TATATEATHAEIAQRLGLEDAKHFVASFDRPNIQYRIVPKNNPQKQLLELVRTEHEGDAG
VVYCLSRASVEKTAAFLVEQGVQAVPYHAGMDARDRAANQARFLREDGVVVVATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGEPATAWLAYGLQDVVQQRKLIDGSEGDD
AHRRSLGMHLDAMLALCETVACRRVRLLAYFGQQGEPCGNCDTCLTPAESWDGTVAAQKL
LSTVWRLAKERRQKFGAGQIIDILQGKKTAKVIQFDHDGLSVFGVGADLSTQEWRGVVRQ
LLAQGLLAVEGDYGTLVLTEASGEVLGGRRSVPMRKEAVQASPSRKASGGRSGKGARVPV
DLPEAAAPVFEALRAWRAATAREQGVPAYVVFHDATLREIATRLPATVAELGTVGGVGEA
KLAKYGEGVLEALAGSGEGGSTAPAPAASAPAPAATPAAPPAQDHDEPPFDEEEPPWDDW
E
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggccctcaccgacgcttcccccgagacctccgacgcactgcgggtgctccaccgcgtc
ttcgggtacgactcgttccgcggcgagcagcaggagatcatcgagcaggtcgtcgcgggc
ggcgacgcgctcgtgctgatgccgaccggcggcgggaagtcgctctgctaccagatcccg
gctctggtcagagacggcacgggcgtcgtgatctcgccgctgatcgcgctcatgcaggac
caggtggacgcgctcaccgccctcggggtgcgggccggattcctcaactccacgcaggcc
ccgcacgaacggcaggccgtcgagcaggccttcctcgccgacgagctggacctgctctac
ctggcgccggagcggctgcgcacggagggcacgcagcgcctgctcgaccgcggcaaggtg
tcgctcttcgcgatcgacgaggcgcactgcgtcgcccagtggggtcacgacttccgaccc
gactacctggccctgtcgatgctgcacgagcgctggccgaaggtgccgcggatcgcgctg
accgcgacggccaccgaggccacccacgccgagatcgcccaacggctcggcctggaggac
gccaagcacttcgtcgcgagcttcgaccggccgaacatccagtaccgcatcgtcccgaag
aacaacccgcagaagcagctcctcgaactggtccggaccgagcacgagggcgacgccgga
gtcgtctactgcctgtcgcgggcctcggtggagaagacggcggcgttcctggtggagcag
ggcgtccaggccgtgccgtaccacgcggggatggatgcccgggaccgcgccgcgaaccag
gcgcgcttcctgcgggaggacggggtcgtggtggtcgccacgatcgccttcggcatgggc
atcgacaagccggacgtgcgcttcgtcgcccacctcgacctgccgaagtccgtcgagggc
tactaccaggagaccggccgcgccggccgcgacggcgagcccgccacggcctggctcgcg
tacggcctgcaggacgtggtccagcagcgcaagctcatcgacggctccgagggcgacgac
gcgcaccgccgctccctcggcatgcacctggacgccatgctcgcgctgtgcgagacggtc
gcctgccgccgggtgcgcctgctggcgtacttcggccagcagggcgagccgtgcggcaac
tgcgacacgtgcctgacgccggccgagtcctgggacggcacggtcgccgcgcagaagctg
ctctccaccgtgtggcggctggccaaggagcggcggcagaagttcggcgcgggccagatc
atcgacatcctgcagggcaagaagacggccaaggtcatccagttcgaccacgacggcctc
tcggtgttcggcgtcggggccgatctgagcacccaggagtggcgcggagtcgtccgccag
ctgctggcgcagggactgctggccgtcgagggcgactacgggacgctcgtgctgacggag
gccagcggcgaggtgctcggcggccgccgcagcgtgccgatgcggaaggaggccgtgcag
gcttccccgtcccgcaaggcctccggcgggcgctccgggaagggcgcccgggtgccggtc
gacctgccggaggccgcggcgccggtcttcgaggcgctccgcgcctggcgggccgcgacg
gcccgcgagcagggcgtcccggcgtacgtcgtcttccacgacgcgacgctgcgggagatc
gcgacgcggctgccggcgacggtcgccgagctcggcaccgtcggcggcgtcggcgaggcc
aagctcgccaagtacggcgagggcgtcctcgaagccctggcggggtccggcgagggcggg
agcaccgcccccgctccggcggcctcggcgcccgcccccgccgcgaccccggcggccccg
ccggcgcaggaccacgacgagccgcccttcgacgaggaggagccgccgtgggacgactgg
gagtag
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