Streptomyces solicathayae: R2D22_03995
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Entry
R2D22_03995 CDS
T11073
Name
(GenBank) HAMP domain-containing protein
Organism
ssli Streptomyces solicathayae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
ATG17_like
Laminin_II
GAF_3
YscO-like
RNase_Y_N
OmpH
ApoLp-III
DUF4527
DUF948
Fez1
Baculo_PEP_C
ATG14
Motif
Other DBs
NCBI-ProteinID:
WOX20598
LinkDB
All DBs
Position
complement(839294..842320)
Genome browser
AA seq
1008 aa
AA seq
DB search
MTEHGPPPDGPPPGGALPARPESGREGLRQLLAGLTAVRDGDLSVRLPDPADPSDAVLGE
IVLVYNEMVDRLSLLTSEVTRVAGEVGGQGLLGGRVREPRARGAWQELTSGVNAMADNLT
SQVRSIAQVATAVARGDLTQKIRVDARGEILELKETINTMVDRLSSFAEEVTRVAREVGT
EGNLGGQATVHGVSGTWKDLTDNVNSMADNLTNQVRNIAQVTTAVAQGDLTSRIDVSARG
EILELKTTINTMVDQLSSFAAEVTRVAREVGTEGQLGGQAEVEGVSGTWKRLTENVNELA
GNLTRQVRAIAEVTSAVAEGDLTRSITVEAPGEVGDLRDNINSMVESLRATTRANQEQDW
LQTNLARITGLLQGTRNLPEIASLIMAEVPPLVSAQYGAFFLAGEDERGTELVVIASYGA
PDEPDAEPRRFRVGQSLVGQAARDRRALLVEQVPAGYATVASGIGSGEPATLIVLPIVVE
DQVLGAVELASLHPFTALHRDFLDRFTDSAGAVLSSLVANLRTDELLGQSRRLADELRSR
SQELQARQQELQRSNAELKEKAALLAQRNKDIESKNRVIEQARQELEERAQELSRTSMYK
SEFLANMSHELRTPLNSLLILARLLSQNPEGNLTEKQVDYAEVIHSAGSDLLQLINDILD
LSKVEAGKMDIRHEPFSLRRLLEYLEATFGPVADERALEFTLSVAPDVPEELTTDEERVR
QILRNLLSNALKFTDEGGVVVTVEYAPADEPPVDLRGDRPVLAFRVTDTGVGIPAERLAH
IFEAFQQGDGTTARRYGGTGLGLSISREVAGLLGGTIRAESTPGRGSRFTFYLPDPTSAA
APAPYATGGPGAFRTAHPPGIASPAPEDASASASPAPGTEGAPAGSRRTVLVVDDDPRNV
FALTEVLEGHGLRVLTADGGRAGVDLVTAHSEIRLVLMDVMMSGMDGYAAIKAIRRLPGR
ADLPVIAVTAKVMPGDRARALNAGADDYLAKPVDGTELMEKIRTWLPD
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgacagagcacggaccacctcccgacggaccacctcccggcggcgcccttccggcgcgg
ccggagtccggcagggaagggctccggcaactgctcgccggactcaccgccgtacgggac
ggggacctctccgtgcggctgcccgatcccgcagacccctccgacgccgtgctcggcgag
atcgtgctggtctacaacgagatggtcgaccggctctccctgctcacctccgaggtcacc
cgcgtcgccggcgaggtcggcggacagggcctgctcggcggccgggtccgtgagccgcgg
gccaggggcgcgtggcaggaactcacctccggcgtcaacgccatggcggacaacctcacc
tcccaggtccgctccatcgcccaggtggccaccgcggtggcccgcggtgacctcacgcag
aagatccgggtggacgcgcgcggcgagatcctggaactgaaggagaccatcaacacgatg
gtcgaccggctctcctccttcgccgaggaggtcacccgggtggcccgcgaggtcggcacc
gagggcaacctcggcgggcaggcgaccgtgcacggcgtctccggcacctggaaggacctg
accgacaacgtcaactccatggccgacaacctgaccaaccaggtgcgcaacatcgcccag
gtcaccaccgccgtcgcccagggcgatctgaccagccggatcgacgtctccgcgcgcggc
gagatcctggagctcaagaccaccatcaacacgatggtggaccagctgtcgtcgttcgcc
gccgaggtgacccgggtggcccgcgaggtcggcaccgagggccagctgggcggccaggcc
gaggtggagggcgtctccgggacctggaagcggctcaccgagaacgtcaacgaactggcc
ggcaacctgacccggcaggtccgcgcgatcgccgaggtcaccagcgccgtcgccgaggga
gacctgacccggtccatcaccgtcgaggcgcccggcgaggtcggggacctgcgggacaac
atcaactcgatggtcgagtcgctgcgcgccaccacccgcgccaaccaggagcaggactgg
ctgcagaccaatctcgcccggatcaccggcctgctgcagggcacccgcaacctgcccgag
atcgcctccctgatcatggccgaggtgccgccgctggtctccgcccagtacggggccttc
ttcctggccggcgaggacgagcggggcaccgagctggtggtgatcgcctcgtacggggcg
ccggacgagccggacgccgagccgcgccgcttccgcgtcggccagtccctcgtcgggcag
gccgcccgggaccgccgggcgctcctcgtcgagcaggtgcccgccgggtacgcgacggtc
gcctcgggcatcggctccggcgagccggccaccctgatcgtgctgccgatcgtcgtcgag
gaccaggtcctcggcgccgtcgaactcgcctcgctgcacccgttcaccgccctgcaccgc
gacttcctggaccggttcacggacagcgcgggcgccgtgctcagctccctcgtcgccaac
ctccgcaccgacgagctgctcggccagtcccgtcggctcgccgacgaactgcgctcccgc
tcgcaggagttgcaggcccggcagcaggaactccagcgctccaacgcggaactgaaggag
aaggccgcgctcctcgcccagcgcaacaaggacatcgagtccaagaaccgggtcatcgag
caggcccgccaggaactggaggagcgggcccaggagttgtcccggacctcgatgtacaag
tccgagttcctcgccaacatgagccacgaactgcggaccccgctcaacagcctgctgatc
ctcgcgcggctgctctcgcagaaccccgagggcaatctgacggagaagcaggtcgactac
gccgaggtcatccactccgccggctccgacctgctgcagctgatcaacgacatcctcgac
ctctccaaggtcgaggcgggcaagatggacatccggcacgagccgttctcgctgcgccgg
ctcctggagtacctggaggcgaccttcgggcccgtcgccgacgaacgggcgctggagttc
accctcagcgtcgccccggacgtcccggaggagctcaccaccgacgaggaacgggtccgc
cagatcctgcgcaacctgctgtccaacgccctcaagttcaccgacgagggcggggtcgtc
gtcacggtggagtacgccccggccgacgagccgccggttgacctgcgaggcgaccggccc
gtcctggccttccgggtcaccgacaccggcgtcggcatccccgccgagcgcctggcgcac
atcttcgaggcgttccagcagggcgacggcaccaccgcgcgccgctacggcggcaccggc
ctcggtctgtccatcagccgagaggtcgccggactgctcggcggcaccatccgggccgag
agcacccccggccggggcagccggttcaccttctacctccccgacccgacgtcggcggcg
gcccccgccccgtacgcgacgggcggccccggcgcgttccgcaccgcgcacccgcccggc
atcgcgagcccggcccccgaggacgcctcggcgtccgcgtcccccgcccccggcaccgaa
ggcgccccggccgggtcccgccggacggtcctggtggtcgacgacgacccccgcaacgtc
ttcgcgctcaccgaggtcctggaggggcacggcctgcgcgtcctcaccgccgacggcggc
agggccggcgtcgacctggtcaccgcgcactccgagatccggctcgtcctcatggacgtg
atgatgtccggcatggacggctacgccgccatcaaggccatcaggcgacttcccggccgc
gccgatctgcccgtcatcgccgtcaccgccaaggtgatgcccggcgaccgcgcccgcgcg
ctgaacgcgggagccgacgactacctcgccaaaccggtcgacgggaccgagctgatggag
aagatccgtacctggcttccggactga
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integrated database retrieval system
