Streptomyces solicathayae: R2D22_10080
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Entry
R2D22_10080 CDS
T11073
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ssli Streptomyces solicathayae
Brite
KEGG Orthology (KO) [BR:
ssli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssli03009
]
R2D22_10080 (rimO)
Enzymes [BR:
ssli01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
R2D22_10080 (rimO)
Ribosome biogenesis [BR:
ssli03009
]
Prokaryotic type
ribosomal protein modification factors
R2D22_10080 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Mur_ligase_C
TRAM
DUF3079
Motif
Other DBs
NCBI-ProteinID:
WOX21733
LinkDB
All DBs
Position
complement(2243889..2245379)
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AA seq
496 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWQLVENAEDADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGKTQAVVAVGCMAERYGKELADALPEADGVLGFDDYADISNRLQTIL
SGGSVEAHTPRDRRKLLPLSPVERQQAAADVALPGHGAAEAPAEAPADLPDGVAPASGPR
APLRRRLDTSPVASVKLASGCDRRCSFCAIPSFRGSFVSRRPSDVLGETRWLAEQGVKEI
MLVSENNTSYGKDLGDIRLLETLLPELAAVDGIERVRVSYLQPAEMRPGLIDVLTSTEKV
APYFDLSFQHSAPDVLRAMRRFGDTDRFLELLETIRTKAPTAGARSNFIVGFPGETEADF
AELERFITHARLDAIGVFGYSDEDGTEAATYEHKLDQDVVDERLAHLSRLAEELTAQRAE
ERLGETLEVLVEAEDEEDGWIGRAAHQAPETDGQVYLTMDSTEDLDLVPGRMVRAKVVGT
EGVDLVAECLFEEAGR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctggcaggccgcttggcagcggacggctggcagctcgtcgagaacgccgag
gacgcggacgtcgccgtcgtcaacacctgtggattcgtcgaggccgccaagaaggactcc
gtcgacgccctcctcgaagccaatgatctgaaggatcacggcaagacccaggccgtggtg
gccgtcggctgtatggccgagcggtacggcaaggagctcgccgacgccctgcccgaggcg
gacggcgtgctcggcttcgacgactacgccgacatcagcaaccggctccagaccatcctc
agcggcggcagcgtcgaggcgcacaccccgcgtgaccggcgcaagctgctgccgctgtcc
ccggtggagcgccagcaggccgccgcggacgtggccctgcccgggcacggcgcggccgag
gcccccgccgaggcgccggccgaccttcccgacggcgtcgccccggcctccggcccgcgc
gccccgctgcgccggcggctcgacaccagccccgtcgcctccgtgaagctcgcctccggc
tgcgaccgccgctgctcgttctgcgccatcccgtccttccgcggctccttcgtctcccgg
cgtccctccgacgtcctcggtgagacgcgctggctcgccgagcagggcgtgaaggagatc
atgctggtctccgagaacaacacctcgtacggcaaggacctcggcgacatccgcctcctg
gagacgctgctgcccgagctggcggccgtggacgggatcgagcgggtccgggtcagctac
ctgcagcccgccgagatgcgcccgggcttgatcgacgtgctgacctcgaccgagaaggtc
gccccgtacttcgacctgtccttccagcacagcgcgcccgacgtgctgcgggcgatgcgc
cgcttcggcgacaccgaccggttcctggagctgctcgagaccatccgcaccaaggccccc
acggccggtgcccggtccaacttcatcgtcggcttccccggcgagaccgaggcggacttc
gccgagctggaacgcttcatcacgcacgcccgtctcgacgccatcggcgtcttcggctac
tccgacgaggacggcaccgaggccgccacgtacgagcacaagctcgaccaggacgtcgtc
gacgagcgtctggcccacctgtcccggctcgccgaggagctcaccgcgcagcgcgcggag
gagcggctcggagagaccctggaggtactggtcgaggccgaggacgaggaggacggctgg
atcggccgggccgcgcaccaggcgcccgagaccgacggccaggtgtacctcacgatggac
tccaccgaggatctcgacctggtccccggccgtatggtcagggccaaggtcgtcggcacc
gagggcgtcgacctggtggccgagtgtctcttcgaggaggcgggcagatga
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