KEGG   Streptomyces solicathayae: R2D22_10130
Entry
R2D22_10130       CDS       T11073                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
ssli  Streptomyces solicathayae
Pathway
ssli03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssli00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    R2D22_10130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssli03019]
    R2D22_10130
Messenger RNA biogenesis [BR:ssli03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     R2D22_10130
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: WOX21739
UniProt: A0ABZ0LQH5
LinkDB
Position
complement(2264753..2266438)
AA seq 561 aa
MSHPHPELGAPPKLPKNGLRVTPLGGLGEIGRNMTVFEFDGRILIVDCGVLFPEEEQPGV
DLILPDFTTLRDRLDDVEGIVLTHGHEDHIGGVPYLLRLKPDIPLIGSKLTLALIEAKLQ
EHRIRPYTLEVAEGQREQLGPFDCEFIAVNHSIPDALAVAIRTPAGTAVATGDFKMDQLP
LDGRLTDLHAFARLSEEGIDLLLSDSTNAEVPGFVPPEKDISNVLRTVFANAQKRIIVAS
FASHVHRIQQILDAAHEYGRRVAFVGRSMVRNMGIARDLGYLRVPAGLVVDVKTLDDLPD
DEVVLVCTGSQGEPMAALSRMANRDHQIRIVPGDTVILASSLIPGNENAVYRVINGLSRW
GANVVHKGNAKVHVSGHASAGELLYFYNICRPKNLMPVHGEWRHLRANAELGALTGIPKD
HIVIAEDGVVVDLVDGKARIVGKVQAGYVYVDGLSVGDVTESSLKDRRILGEEGIISAFV
VVDSTTGKIVSGPNIHARGSGIDDSAFNAVVPKLEEVLNKSAQDGVMEPHQLQQLIRRTI
GKWVSDTYRRRPMILPVVVEV
NT seq 1686 nt   +upstreamnt  +downstreamnt
ttgagtcatccgcatcctgaactcggcgccccgccgaagcttcccaagaacggtctgcgc
gtcacgccgctcggcgggctcggcgagatcggccggaacatgacggtcttcgaattcgac
ggccgcatcctgatcgtcgactgcggcgtcctcttccccgaagaggagcagcccggcgtc
gacctgatcctgccggacttcaccaccctccgggaccgcctggacgacgtcgagggcatc
gtcctcacgcacggccacgaggaccacatcggcggcgtcccgtacctgctccggctcaag
ccggacatcccgctgatcggttccaagctgaccctggccctcatcgaggccaagctccag
gagcaccgcatccgcccctacaccctcgaggtggccgaggggcagcgcgagcagctcgga
ccgttcgactgcgagttcatcgcggtcaaccactccatcccggacgccctggcggtcgcc
atccgcacccccgcgggcacggccgtcgccaccggcgacttcaagatggaccagctcccg
ctggacggccgcctcacggacctgcacgcgttcgcgcggctgagcgaggaaggcatcgac
ctcctcctctcggactcgacgaacgccgaggtgccgggtttcgtcccgccggagaaggac
atctcgaacgtcctgcgcacggtcttcgcgaacgcccagaagcggatcatcgtggccagc
ttcgccagccacgtgcaccgcatccagcagatcctcgacgccgcccacgagtacggccgc
agggtcgccttcgtcggccggtcgatggtccgcaacatgggcatcgcccgtgacctgggc
tacctgcgggtccccgccggcctcgtcgtcgacgtcaagacgctcgacgacctgccggac
gacgaggtcgtgctcgtctgcacgggctcccagggcgagcccatggcggccctgtcccgc
atggccaaccgcgaccaccagatccggatcgtccccggtgacacggtgatcctggcgtcg
tccctgatcccgggcaacgagaacgcggtctaccgcgtgatcaacggcctgagccgctgg
ggcgccaacgtggtccacaagggcaacgccaaggtgcacgtctcgggccacgcctcggcc
ggcgagctgctgtacttctacaacatctgccgcccgaagaacctcatgccggtccacggc
gaatggcgccacctgcgtgccaacgccgagctcggcgcgctgacggggatccccaaggac
cacatcgtcattgccgaggacggcgtggtcgtcgacctggtcgacggcaaggcccgcatc
gtcggcaaggtccaggccggttacgtgtacgtcgacggcctctcggtcggcgacgtcacc
gagtcctccctgaaggaccgccgcatcctcggtgaggagggcatcatctcggccttcgtc
gtcgtcgactcgacgaccggcaagatcgtgagcggcccgaacatccacgcccgcggttcc
ggcatcgacgactcggcgttcaacgccgtggtcccgaagctcgaagaggtcctgaacaag
tcggcccaggacggcgtcatggagccccaccagctccagcagctgatccgccgcacgatc
ggcaagtgggtgtccgacacctaccgccggcgcccgatgatccttccggtcgtcgtcgag
gtctga

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