Streptomyces solicathayae: R2D22_10280
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Entry
R2D22_10280 CDS
T11073
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssli Streptomyces solicathayae
Brite
KEGG Orthology (KO) [BR:
ssli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssli03016
]
R2D22_10280 (truB)
Enzymes [BR:
ssli01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
R2D22_10280 (truB)
Transfer RNA biogenesis [BR:
ssli03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
R2D22_10280 (truB)
Prokaryotic type
R2D22_10280 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WOX21766
LinkDB
All DBs
Position
complement(2304439..2305341)
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AA seq
300 aa
AA seq
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MSQQHKKTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVERA
TKLLGHLALTEKEYLGTIRLGQTTITDDAEGEITASVDASKVTREGIDAGVAELTGAIMQ
VPSKVSAIKIDGKRSYARVRGGEEFEIPARPVTVSQFTVYDVREAVAEDGTPVVDLVVSV
VCSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYKLDSARTLDQLQEELTVMPVAEAA
EAAFERWDVDEKRARLLLNGVRLDMPETGPGPVAVFGPGDKLLALVENHKGRAKSLAVFG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcagcacaagaagacgcccgacgggcttgtcatcgtcgacaagccgtcgggc
ttcacttcgcacgacgtcgtggccaagatgcgcgggatcgcccggacccgccgcgtcggc
cacgccggaaccctcgacccgatggcgaccggcgtgctggtcctcggcgtcgagcgggcc
accaagctcctcggtcacctcgcgctgaccgagaaggagtacctcggcacgatccggctc
gggcagaccacgatcacggacgacgccgagggcgagatcaccgcgtccgtcgacgcctcg
aaggtgacccgggagggcatcgacgccggcgtggcggagctgaccggcgccatcatgcag
gtgccgtcgaaggtctccgcgatcaagatcgacggcaagcggtcgtacgcgcgggtgcgc
ggcggcgaggagttcgagatcccggcccggccggtcaccgtgtcgcagttcacggtgtac
gacgtccgcgaggccgtcgccgaggacggcacgcccgtcgtcgacctcgtcgtctccgtc
gtctgctcgtccggtacgtacatccgcgccctcgcccgtgacctgggcgccgggctcggc
gtgggcggccacctgacggcgctgcggcgcacccgggtcggcccgtacaagctggactcc
gcgcgcacgctcgaccagctccaggaggagctgacggtcatgccggtcgccgaggcggcc
gaggcggcgttcgagcgctgggacgtggacgagaagcgggcccgcctgctgctcaacggc
gtccgcctggacatgccggagaccgggccggggccggtcgcggtcttcggaccgggcgac
aagctgctcgcgctcgtggagaaccacaagggccgggcgaagagcctggcggtcttcggc
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