Streptomyces solicathayae: R2D22_12330
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Entry
R2D22_12330 CDS
T11073
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
ssli Streptomyces solicathayae
Brite
KEGG Orthology (KO) [BR:
ssli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssli03021
]
R2D22_12330
Transcription machinery [BR:
ssli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
R2D22_12330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
PF0610-like_N
MarR_2
HTH_24
NirdL-like_HTH
HTH_AsnC-type
HTH_10
HTH_3
DUF7343
Sigma70_ECF
HTH_Crp_2
MarR
IF2_N
DUF8073_C
GerE
HTH_ParB
HTH_AraC
HTH_28
DUF4423
Motif
Other DBs
NCBI-ProteinID:
WOX26619
UniProt:
A0ABZ0M4A6
LinkDB
All DBs
Position
2749667..2750635
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AA seq
322 aa
AA seq
DB search
MHATAGIPEQQATEQAQVGGTSQAEPWGRAVHMSEQEQHEPKQQDDPDTSDKSDERLDGH
DEHVEPVEAPDPHDRSGAKAMFVELRGLPEGSAEKAELRNQLVRMHLPLVEHLARRFRNR
GEPLDDLTQVATIGLIKSVDRFDPERGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQ
ELRLSLTTATAELSQQHGRSPTVHELAERLGISEEEVLEGLESANAYSTLSLDVPDTDDE
SPAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQ
MHVSRLLARTLAQLREKLLVEE
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
ctgcacgccacggcgggcatccctgaacagcaagctacggagcaggcgcaggttgggggt
acctcccaggcggagccctgggggagggcggtccatatgagcgagcaagagcagcacgaa
cccaagcagcaggacgatcccgacacgagcgacaagagcgacgagcggctcgacgggcac
gacgagcacgtcgagcccgtcgaggccccggatccgcacgaccggagcggggccaaggcg
atgttcgtcgagcttcgggggctcccggagggctccgcggagaaggcggagctgcgcaac
cagctggtgcggatgcacctgccgctggtggagcacctcgcgcgccggttccgcaaccgg
ggcgagccgctggacgacctcacccaggtcgccacgatcggtctgatcaagtcggtggac
cggttcgacccggagcgcggcgtcgagttctcgacgtacgcgacgcccaccgtggtcggt
gagatcaagcgccacttccgggacaagggctgggcggtccgggtgccgcgccggctccag
gagctgcggctctcgctgacgacggcgacggcggagctgtcccagcagcacggccgctcc
cccacggtgcacgagctcgccgagcggctcggcatctcggaggaggaggtcctggagggc
ctggagtccgcgaacgcgtactcgacgctctcgctggacgtgccggacacggacgacgag
tccccggcggtcgcggacacgctgggcgcggaggacgaggcgctggagggcgtcgagtac
cgcgagtccttgaagccgctccttgaggacctgccgccgcgagagaagcggatcctgttg
ctccggttcttcgggaacatgacccagtcgcagatcgcacaggaggtcggcatctcgcag
atgcacgtctcccggctgctcgcccgcacgctggcgcagctgcgggagaagctcctggtg
gaggagtga
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integrated database retrieval system
