Streptomyces solicathayae: R2D22_12615
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Entry
R2D22_12615 CDS
T11073
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssli Streptomyces solicathayae
Pathway
ssli03420
Nucleotide excision repair
ssli03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R2D22_12615
03430 Mismatch repair
R2D22_12615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssli03400
]
R2D22_12615
Enzymes [BR:
ssli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R2D22_12615
DNA repair and recombination proteins [BR:
ssli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R2D22_12615
MMR (mismatch excision repair)
Other MMR factors
R2D22_12615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WOX22183
LinkDB
All DBs
Position
complement(2807241..2810648)
Genome browser
AA seq
1135 aa
AA seq
DB search
MTARLTDPEQLKELLGIPFTPEQTACIVAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRTALVRAGVTDPDVIDPDNPPGEPRISTYHAFAGQLL
TDHGLRIGLEPTARLLADATRYQLAARVLREAPGPYPALTKSFPTLVGDLLALDAELAEH
LVRPAELRAYDGELLRALESARLSNADLRKVPEAAAARRELLDLVVRYRAAKRSRDLLDF
GDQIALSAELATTRPEVGTLLRDEFRVVLLDEYQDTSVAQRLLLSGLFGGGTGHAVTAVG
DPCQAIYGWRGASVANLDDFPEHFPYADGTPATRYSLSENRRSGGRLLDLANGLAEPLRA
MHEGVEALRPAPGAERDGTVRIALLPTHAEELDWLADSIAHLVRTGREPGEIAVLCRTAT
DFPAIQAALVARDVPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLTGPRWRI
GPRDLALLGRRARLLVHRADGGSDDADERLAAAVEGVDPAEVISLADALDTFLDSGGEDD
GLPFSAEARVRFARLAAELRGLRTALADPLMDVLHRVLATTGLEVELSASPHALAARRRE
TLSNFLDVAAGFASLDGEATLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHKSKGL
EWDVVAVPGLVTSQFPSARARESWTAQAQVLPHALRGDAATLPAIDDWSAASLKTFKEEM
REHQHTEELRLGYVTFTRPRSLLLGSAHWWGPSQKRPRGPSAFLHALYEHCAAGHGEIEA
WADEPEKDAENPTLQDDLADQAWPLPLDETSLKRRREAARRVMDALWAQPANALSAQVSE
HAPEPEDEEPPYDPYWDDEPPPEEPAPEEEPPLEDIPAPRAPQHQAEAPRLTPEETRTIA
SWDRDLTVLAEELRRSRSRTRDVLLPTYLTTSQVMRLAADPDGFAQDLARPMPRPPQPAA
RRGTRFHAWVEAQFEELPLPMLGPDELPGGEEFADEPEIVDERDLAALKDAFVLTPYAHR
TPYRVEAPVQLSLAGRVVRGRIDAVYRDETTGAYEIVDWKTSRLHAADPLQLAIYRLAWA
EQHGLDPDEVAAAFVYVRTGEVARPERLPGRAELEELLRGSGGGATPERPAPGAG
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcacgcctcaccgaccccgagcagctcaaggagctgctcggcatcccgttcacg
ccggagcagacggcctgcatcgtcgcgcccccggcgccgcaggtcatcgtggccggcgcg
ggctcgggcaagacgacggtgatggccgcccgggtggtctggctggtcggcaccgggcag
gtcgcgcccgagcaggtcctcggcctcaccttcaccaacaaggccgccggcgagctcgcc
gagcgcgtccgcaccgcgctcgtacgggccggggtcaccgaccccgacgtcatcgaccct
gacaaccccccgggtgagccgcgcatctccacgtaccacgccttcgccgggcagctcctc
accgaccacggtctgcgcatcggcctggagcccactgcccggctgctcgccgacgccacc
cgctaccagctcgccgcccgcgtgctgcgcgaggcaccgggcccgtaccccgcgctcacc
aaatcgttcccgacgctcgtcggcgacctgctcgcgctcgacgccgaactggccgagcat
ctggtgcggcccgccgaactccgcgcgtacgacggcgagctgctgcgcgccctggagtcc
gccaggctcagcaacgccgacctgcgcaaggtccccgaggccgccgcggcccgccgcgaa
ctgctcgacctcgtcgtccgctaccgcgccgccaagcgctcccgcgacctgctcgacttc
ggcgaccagatcgccctctccgccgaactggccaccacccgccccgaggtcgggacgctg
ctgcgggacgagttccgggtcgtcctgctcgacgagtaccaggacacctccgtcgcccaa
cggctgctcctgtccggcctgttcggcggcggcaccggccacgcggtgaccgccgtcggc
gacccctgccaggcgatctacggctggcgcggcgcgtccgtggccaacctggacgacttc
cctgagcacttcccgtacgcggacggcacacccgccacccgctactcgctgagcgagaac
cggcgcagcggcggccggctcctcgacctcgccaacgggctcgccgagccgctgcgggcc
atgcacgagggcgtcgaggcgctgcggcccgcgccgggcgcagagcgggacgggacggtc
cggatcgccctgctccccacgcacgcggaggagctcgactggctggccgactcgatcgcc
cacctcgtccgcaccggccgcgagcccggcgagatcgccgtgctgtgccggaccgcgacc
gacttcccggcgatccaggcggccctggtcgcccgggacgtccccgtcgaggtcgtcggc
ctgtccgggctgctgcacctgcccgaggtcgccgacctggtcgcggtctgcgaggtcctc
caggacccgggcgccaacgcctccctggtccggctgctcaccggcccgcgctggcgcatc
ggcccgcgcgacctcgccctgctcggccgccgcgcccggctgctcgtccaccgcgccgac
ggcggctccgacgacgcggacgagcggctcgcggcggcggtcgagggcgtcgacccggcc
gaggtgatctccctcgcggacgcgctcgacaccttcctcgactccggcggcgaggacgac
ggactgccgttctcggcggaggcgcgggtccggttcgcccgcctcgcggccgaactgcgc
gggctgcgcacggccctcgcggacccgctgatggacgtcctgcaccgggtgctcgccacg
accggactggaggtcgagctgtcggcgtccccgcacgccctggccgcccgccgccgcgag
accctttccaacttcctcgacgtcgcggccggtttcgcctcgctcgacggcgaggcgacg
ctgctggccttcctcggcttcctgcgcaccgccgcccagtacgagaagggcctggacaac
gcgctgcccggcggcgagaacaccgtcaaggtgctgaccgcgcacaagtccaagggcctg
gagtgggacgtggtcgccgtgcccggcctggtcacctcgcagttcccgagcgccagggcg
cgcgagtcctggaccgcgcaggcgcaggtgctgccgcacgccctgcgcggcgacgcggcg
accctgccggcgatcgacgactggtcggcggcctcgctcaagaccttcaaggaggagatg
cgggagcaccagcacacggaggagctgcgcctcgggtacgtgacgttcacccggccgcgc
tcgctgctgctcggctccgcgcactggtggggcccgtcccagaagcggccgcgtggcccg
tcggcgttcctgcacgcgctgtacgagcactgcgcggcgggccacggcgagatcgaggcc
tgggcggacgagccggagaaggacgcggagaaccccaccctccaggacgacctggccgac
caggcctggcccctgcccctggacgagacgagcctgaagcgccgaagggaagcagcgcgg
cgcgtcatggacgcgttgtgggcgcagcccgcgaacgcgctgtccgcgcaggtctccgag
cacgctcccgagccggaggacgaggagcccccgtacgacccgtactgggacgacgagccc
ccgccggaggagcctgcgccggaggaggagcctccgctggaggacatccctgccccgagg
gcgccgcagcaccaggccgaggcgccccgcctcactccggaggagacccgcaccatcgcc
tcctgggaccgtgacctcaccgtcctcgccgaagagctccgccgcagccgctcccgcacc
cgcgacgtcctgctccccacctacctgacgacctcccaggtcatgcgcctcgccgccgac
cccgacggcttcgcgcaggacctcgcgcggcccatgcccaggccgccgcagcccgccgcc
cggcgcggcacacggttccacgcctgggtggaggcgcagttcgaggagctgccgctgccc
atgctcgggccggacgagctgcccggcggcgaggagttcgccgacgaacccgagatcgtc
gacgagcgcgacctcgccgcgctcaaggacgccttcgtcctcaccccgtacgcccaccgg
accccgtaccgcgtcgaggccccggtccagctgtccctggcgggccgggtcgtacgcggc
aggatcgacgccgtgtaccgggacgagacgaccggcgcgtacgagatcgtcgactggaag
accagccggctgcacgccgccgacccgctccagctcgcgatctaccggctcgcctgggcc
gagcagcacggcctcgaccccgacgaggtggccgccgcgttcgtctacgtgcgcaccggc
gaggtcgcccgccccgagcggctgcccggccgcgccgagctggaggagctgctccgtggt
tccggcggcggggccaccccggagagacccgctccgggcgccggatag
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