Streptomyces solicathayae: R2D22_14960
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Entry
R2D22_14960 CDS
T11073
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ssli Streptomyces solicathayae
Pathway
ssli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R2D22_14960 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssli03019
]
R2D22_14960 (groL)
03110 Chaperones and folding catalysts [BR:
ssli03110
]
R2D22_14960 (groL)
03029 Mitochondrial biogenesis [BR:
ssli03029
]
R2D22_14960 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssli04147
]
R2D22_14960 (groL)
Enzymes [BR:
ssli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
R2D22_14960 (groL)
Messenger RNA biogenesis [BR:
ssli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
R2D22_14960 (groL)
Chaperones and folding catalysts [BR:
ssli03110
]
Heat shock proteins
HSP60 / Chaperonin
R2D22_14960 (groL)
Mitochondrial biogenesis [BR:
ssli03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
R2D22_14960 (groL)
Exosome [BR:
ssli04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
R2D22_14960 (groL)
Exosomal proteins of other body fluids (saliva and urine)
R2D22_14960 (groL)
Exosomal proteins of breast cancer cells
R2D22_14960 (groL)
Exosomal proteins of colorectal cancer cells
R2D22_14960 (groL)
Exosomal proteins of bladder cancer cells
R2D22_14960 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WOX22630
UniProt:
A0ABZ0LT14
LinkDB
All DBs
Position
complement(3317616..3319244)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
IEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSEELLATARPIEDKSDIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYMVTDQERMEAVLDDPYILIHQGKISSIQDLLPILEKIIQ
AGASKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDMATLTGATV
IAEEVGLKLDQAGLDVLGTARRVTISKDDTVIVDGGGSSDEVVGRVNQIKAEIESTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLEGNLDKTGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVAELDKGQGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEPADAGHGHGHGH
SH
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgcccttgagcgcggcgtcaac
aagcttgccgacacggtcaaggtgacgatcggccccaagggtcgcaacgtcgtcatcgac
aagaagttcggcgcccccaccatcaccaacgacggtgtcacgatcgcccgcgaggtcgag
atcgaggacccgtacgagaacctcggcgcgcagctggtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgccaccgtgctggcccaggcgctggtccgc
gagggtctgcgcaacgtcgccgccggcgcctccccggccgccctcaagaagggcatcgac
gccgcggtcaaggccgtgtccgaggagctcctcgcgaccgcccgcccgatcgaggacaag
tccgacatcgccgccgtcgccgcgctctccgcgcaggaccagcaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtctggagctcgacttcaccgagggcatggccttcgacaagggctacctgtccccg
tacatggtgaccgaccaggagcgtatggaggccgtcctcgacgacccgtacatcctgatc
caccagggcaagatctcgtccatccaggacctgctgccgatcctggagaagatcatccag
gccggcgccagcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcg
accctggtcgtcaacaagatccgcggcaccttcaacgcggtggccgtcaaggcccccggc
ttcggcgaccgccgcaaggcgatgctcggcgacatggccaccctcaccggtgccaccgtc
atcgccgaggaggtcggcctcaagctcgaccaggccggtctggacgtgctgggcaccgcc
cgccgcgtgacgatctccaaggacgacaccgtcatcgtcgacggcggcggaagctccgac
gaggtcgtcggccgcgtcaaccagatcaaggccgagatcgagtccaccgactccgactgg
gaccgcgagaagctgcaggagcgcctggcgaagctcgccggcggcgtgtgcgtcatcaag
gtcggcgccgccaccgaggtggagctcaaggagaagaagcaccgtctcgaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggcggtggctccgctctggtc
cacgccgtcaaggtcctcgagggcaacctcgacaagaccggcgacgaggccacgggtgtc
gcggtcgtccgccgcgccgccgtcgagccgctgcgctggatcgccgagaacgccggcctc
gagggctacgtcatcacctccaaggtggcggagctggacaagggccagggcttcaacgcc
gcgaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtgaaggtgacg
cgctccgcgctggagaacgccgcctcgatcgcctccctccttctcacgaccgagaccctg
gtcgtcgagaagaaggaggaggagccggcggacgcgggccacggccacggccacggtcac
tcccactga
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