Streptomyces solicathayae: R2D22_18345
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Entry
R2D22_18345 CDS
T11073
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ssli Streptomyces solicathayae
Brite
KEGG Orthology (KO) [BR:
ssli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssli03032
]
R2D22_18345 (gyrB)
03400 DNA repair and recombination proteins [BR:
ssli03400
]
R2D22_18345 (gyrB)
Enzymes [BR:
ssli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
R2D22_18345 (gyrB)
DNA replication proteins [BR:
ssli03032
]
Prokaryotic type
DNA Topoisomerases
R2D22_18345 (gyrB)
DNA repair and recombination proteins [BR:
ssli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
R2D22_18345 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WOX23245
LinkDB
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Position
complement(3999997..4002045)
Genome browser
AA seq
682 aa
AA seq
DB search
MLCQKGRFVADSGNPNENTPSANAASYDASAITVLEGLDAVRKRPGMYIGSTGERGLHHM
VQEVVDNSVDEALAGHADTIDVTILADGGVRVVDNGRGIPVGIVPSEGKPAVEVVLTVLH
AGGKFGGGGYAVSGGLHGVGVSVVNALSTKVAVEVKTDGYRWTQDYKMGAPTAPLAKHEA
TEETGTSVTFWSDPDIFETTEYSFETLSRRFQEMAFLNKGLTIVLTDERESAKATVGADD
PDAEAAAEPAARTVKYHYEGGIVDFVKYLNSRKGDLIHPTVIDVEAEDKERMLSVEIAMQ
WNSSYSEGVYSFANTIHTHEGGTHEEGFRAALTTLVNKYARDKKLLREKDDNLTGDDIRE
GLTAIISIKLGEPQFEGQTKTKLGNTEAKTFVQKVVHEHLTDWFDRNPNEAADIIRKAIT
AATARVAARKARDLTRRKGLLESASLPGKLSDCQSNDPTKCEIFIVEGDSAGGSAKSGRN
PMYQAILPIRGKILNVEKARIDKILQNTEVQALISAFGTGVHEDFDIEKLRYHKIILMAD
ADVDGQHINTLLLTFLFRFMRPLVEAGHVYLSRPPLYKIKWGRDDFEYAYSDRERDALVE
LGKQNGKRIREDSIQRFKGLGEMNAEELRVTTMDVEHRVLGQVTLDDAAQADDLFSVLMG
EDVEARRSFIQRNAKDVRFLDI
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtgccagaaagggcgcttcgtggccgattccggcaaccccaacgagaacactccg
tccgccaacgctgcgtcgtacgacgccagcgcgatcaccgtcctcgagggtctggacgca
gtccgcaagcgccccggcatgtacatcggctcgaccggtgagcggggactgcaccacatg
gtgcaggaggtcgtcgacaactccgtcgacgaggccctggcagggcacgcggacaccatc
gacgtgacgatcctcgccgacggcggcgtacgggtcgtcgacaacggccgaggcatcccg
gtgggcatcgtcccgtccgagggcaagccggccgtcgaggtcgtgctgaccgtgctgcac
gcgggcggcaagttcggcggcggcggctacgcggtctccggtggtctgcacggcgtcggc
gtctccgtcgtgaacgccctgtccaccaaggtcgccgtcgaggtgaagaccgacggctac
cgctggacgcaggactacaagatgggcgccccgaccgcgcccctcgccaagcacgaggcc
acggaggagaccggcacctcggtcaccttctggtccgacccggacatcttcgagacgacc
gagtactccttcgagacgctctcgcgccgtttccaggagatggccttcctcaacaagggc
ctgacgatcgtcctcaccgacgagcgcgagtccgcgaaggccacggtcggcgccgacgac
ccggacgccgaggcggccgccgagcccgccgcccgcacggtgaagtaccactacgagggc
ggcatcgtcgacttcgtgaagtacctcaactcgcgcaagggcgacctgatccaccccacc
gtcatcgacgtcgaggccgaggacaaggagcgcatgctctcggtcgagatcgcgatgcag
tggaattcgtcgtactccgagggcgtgtactcgttcgcgaacacgatccacacccacgag
ggcggtacgcacgaggagggcttccgcgccgcgctgacgacgctcgtcaacaagtacgcg
cgcgacaagaagctgctccgcgagaaggacgacaacctcacgggcgacgacatccgcgag
ggtctgacggcgatcatctcgatcaagctcggcgagccgcagttcgagggtcagacgaag
acgaagctcggcaacaccgaggcgaagaccttcgtccagaaggtcgtccacgagcacctc
acggactggttcgaccggaacccgaacgaggccgcggacatcatccgcaaggccatcacg
gccgccaccgcgcgcgtcgcggcccgcaaggcccgtgacctgacccgccgcaagggtctg
ctggagtcggcgtccctgccgggcaagctgagcgactgccagtcgaacgacccgacgaag
tgcgagatcttcatcgtcgagggtgactccgccggcggctcggccaagtcgggccggaac
ccgatgtaccaggccatcctgccgatccgcggcaagatcctgaacgtcgagaaggcgcgg
atcgacaagatcctgcagaacaccgaggtccaggcgctgatctcggccttcggcaccggt
gtgcacgaggacttcgacatcgagaagctccgctatcacaagatcatcctgatggcggac
gccgacgtcgacggccagcacatcaacaccctgctgctgacgttcctgttccgcttcatg
cggccgctggtcgaggcgggccacgtctacctgtcccgtccgccgctgtacaagatcaag
tggggccgggacgacttcgagtacgcgtactcggaccgcgagcgcgacgcgctggtcgag
ctgggcaagcagaacggcaagcggatccgcgaggactcgatccagcgcttcaagggtctg
ggcgagatgaacgccgaggagctgcgcgtcaccacgatggacgtcgagcaccgggtgctc
ggccaggtcaccctggacgacgcggcccaggccgacgacctgttctcggtgctgatgggc
gaggacgtcgaggcgcgtcgctcgttcatccagcgcaacgccaaggacgttcgcttcctc
gacatctga
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