Streptomyces solicathayae: R2D22_19515 Help Entry R2D22_19515       CDS       T11073                                  Symbol hrpA Name (GenBank) ATP-dependent RNA helicase HrpA   KO K03578   ATP-dependent RNA helicase HrpA [EC:5.6.2.6] Organism ssli  Streptomyces solicathayae Brite KEGG Orthology (KO) [BR:ssli00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ssli03019]     R2D22_19515 (hrpA) Enzymes [BR:ssli01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      R2D22_19515 (hrpA) Messenger RNA biogenesis [BR:ssli03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Others      R2D22_19515 (hrpA) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DUF3418 OB_NTP_bind Helicase_C HA2_C DEAD AAA_19 WHD_HA2 AAA_22 nSTAND3 T2SSE AAA_16 NACHT nSTAND_NTPase5 PhoH SLFN-g3_helicase ResIII AAA_25 DUF6139 NTPase_1 TsaE Motif Other DBs NCBI-ProteinID:  WOX23458 UniProt:  A0ABZ0LXC7 LinkDB All DBs Position complement(4228837..4232790) Genome browser AA seq 1317 aa AA seqDB search MSTSFAALQTVLAEVSLRDAHRLGRRLEGARRIRKPEAREAVLDEIAAEAGKAKERVDGR ATRVPTVTYPEQLPVSQKKDEILEAIRDHQVVIVAGETGSGKTTQIPKICLELGRGVRGM IGHTQPRRIAARTVAERVAEELRTPLGEAVGWKVRFTDQVNPDATFVKLMTDGILLAEIQ TDRELRAYDTIIIDEAHERSLNIDFLLGYLAQLLPKRPDLKVVITSATIDPERFSRHFGD APIVEVSGRTYPVEVRYRPLLEEDSEEADRDQITAICDAVDELQGEGAGDILVFLSGERE IRDTADALIKKKLRNTEVLPLYARLSHAEQHRVFQAHTGRRIVLATNVAETSLTVPGIKY VIDPGTARISRYSHRTKVQRLPIEPVSQASANQRKGRCGRTSDGICIRLYSEDDFVSRPE FTDAEILRTNLASVILQMTAAGLGDIEKFPFIDPPDHRNIRDGVQLLQELGALDLAEKSP REGKRGQRLTQQGRKLAQLPVDPRLARMVLEADKNGCVREVMVIAAALSIQDPRERPAEK QAQADQQHARFKDETSDFLAFLNLWRYVREQQKERGSSSFRRMCKQEYLNFLRIREWQDI YAQLRTVAKQMGIHVNEEDAPELSVHTSLLAGLLSHVGMKDVKEGAKNEYLGARNAKFAI FPGSALFKKPPRFVMSAELVETSRLWARVNAKVEPEWIEPLAQHLVKKTYSEPHWEKDQA AVMAIEKVTLYGVPIVTDRKVNYGRIDPEVSRDLFIRNALVEGDWRTHHKFFADNRKLLT EVEELEHRARRRDILVDDETLFDFYDKRVPEHVVSGAHFDSWWKHKRHEEPEFLDFEREM LINEKAGAVTKADYPDSWRQGQLKFRVTYQFEPGADADGVTVHIPLQVLNQVTDEGFEWQ IPGLRPEVVTELIRSLPKPIRRNYVPAPNFAGRFLDTVVPVQEPLATALARELQRMVGVP VTPEDFDWAKVPEHLKITFRIVDERRRKLAEDKDLEALKLKLRPKARQALSKAAAAATAG PSGSGQSLERTGLTDWTIGTLTKVFETRRAGQPVKAYPALVDAGETVSVRLFDTEAEQAA AMWQGTRKLIMLNIPVNPAKFASDKLTNQQKLALSRNPHGNVQALFEDCATAAADRLIAD HGGPAWDEESFRKLFDKVRADLVELTIRTVGQVQQILAAWQACERRLKATNSLALINNVT DVRNQLAWLVPAGFVTRTGLRRLPDLMRYLVAADRRLQQMPTGAQRDTTRMEKVHEMLDE YAWLLEQLPKGRPVPTEVTDIRWMIEELRVSYFAHALGTAYPVSDKRIVKAIDAAAP NT seq 3954 nt NT seq  +upstreamnt  +downstreamnt atgtctacttccttcgccgccctccagaccgttctggccgaggtctcgctgcgggacgcc caccggctcggccgccgtctcgaaggcgcccgccgcatccgcaagcccgaggcccgcgag gccgtgctggacgagatcgccgccgaggccggcaaggccaaggagcgcgtcgacgggcgc gccacccgcgtgcccacggtcacgtaccccgagcagctgcccgtctcccagaagaaggac gagatcctggaggcgatacgcgaccaccaggtcgtgatcgtcgccggtgagacgggctcc ggaaagacgacccagatccccaagatctgcctggagctgggccgcggcgtacggggcatg atcggccacacgcagccccgccggatcgccgcccgcacggtcgccgaacgcgtcgcggaa gagctgcggaccccgctcggcgaggcggtcggctggaaggtccggttcaccgaccaggtc aacccggacgcgaccttcgtcaagctgatgacggacggcatcctgctcgccgagatccag acggaccgcgagctgcgcgcctacgacacgatcatcatcgatgaggcccacgagcggtcc ctcaacatcgacttcctgctcggctatctggcccagctgctcccgaagcgccccgacctc aaggtcgtgatcacctccgcgaccatcgaccccgagcgcttctcccgccacttcggcgac gcgccgatcgtcgaggtcagcggccgtacgtaccccgtcgaggttcggtaccgccccctc ctggaggaggactccgaagaagcggaccgggaccagatcaccgcgatctgcgacgccgtg gacgagctccagggcgagggcgccggcgacatcctggtcttcctctccggcgagcgggag atccgcgacaccgcggacgcgctgatcaagaagaagctgcggaacaccgaggtcctccct ctctacgcgcgcctctcgcacgccgagcagcatcgcgtcttccaggcgcacaccggccgc cggatcgtcctcgcgaccaacgtcgccgagacgtccctcaccgtccccggcatcaagtac gtgatcgacccgggcaccgcccggatctcccggtactcgcaccgcaccaaggtccagcga ctgccgatcgagccggtcagccaggccagcgccaaccagcgcaagggccgctgcggccgt acgtcggacggcatctgcatccgcctctactcggaggacgacttcgtctcccggccggag ttcacggacgcggagatcctccgtacgaacctggcgtccgtcatcctccagatgaccgcg gccggcctcggcgacatcgagaagttccccttcatcgacccgccggaccaccgcaacatc cgcgacggcgtgcagctcctccaggagctcggggctctggacctggcggagaagtccccc cgagaggggaagcgggggcagcggctcacccagcagggccggaagctcgcccagctcccc gtcgacccgcgcctcgcccgcatggtcctggaggcggacaagaacggctgcgtgcgcgag gtcatggtgatcgccgccgcgctgtccatccaggacccgcgcgagcggccggccgagaag caggcgcaggccgaccagcagcacgcccgcttcaaggacgagacgagcgacttcctcgcc ttcctcaacctctggcgctacgtccgcgagcagcagaaggagcgcggctcgtcctccttc cgccggatgtgcaagcaggagtacctgaacttcctgcggatccgcgagtggcaggacatc tacgcccagctgcggacggtcgccaagcagatgggcatccacgtcaacgaggaggacgcg ccggagctgtccgtccacacctcgctcctcgccggcctcctttcgcacgtcggcatgaag gacgtgaaggagggtgccaagaacgagtacctgggcgcgcgcaacgccaagttcgcgatc ttccccggctcggcgctgttcaagaagccgccgcggttcgtcatgtccgccgagctggtg gagacctcgcgcctgtgggcccgggtcaacgccaaggtcgagccggagtggatcgagccg ctcgcgcagcacctcgtgaagaagacgtacagcgagccgcactgggagaaggaccaggcg gcggtcatggcgatcgagaaggtgacgctgtacggcgtcccgatcgtcaccgaccgcaag gtgaactacggccggatcgaccccgaggtctcccgcgacctgttcatccgcaacgcgctc gtcgagggcgactggcgcacgcaccacaagttcttcgccgacaaccgcaaactcctcacc gaggtcgaggagttggagcaccgggcccgccgccgggacatcctcgtcgacgacgagacg ctcttcgacttctacgacaagcgggtgcccgaacacgtcgtgtcgggcgcgcacttcgac tcctggtggaagcacaagcgccacgaggaacccgagttcctcgacttcgagcgcgagatg ctcatcaacgagaaggccggggcggtcaccaaggccgactatccggactcgtggcgccag gggcagctgaagttccgggtgacgtaccagttcgagccgggcgcggacgcggacggcgtg accgtccacatcccgctccaggtgctcaaccaggtcaccgacgagggcttcgagtggcag atcccgggcctgcgcccggaggtcgtgaccgagctgatccgctcgctgccgaagccgatc cgccgcaactacgtcccggcgccgaacttcgcgggccgcttcctggacaccgtcgtgccc gtgcaggagccgctggcgacggcgctggcccgcgagctgcagcggatggtcggggtgccg gtcacgcccgaggacttcgactgggcgaaggtccccgagcacctcaagatcaccttccgg atcgtcgacgagcgacgccgcaagctcgccgaggacaaggacctggaggcgctgaagctg aagctgcgccccaaggcccgccaggcgctctccaaggccgccgcggcggccacggccggc ccgagcggctccgggcagtccctggagcgcacggggctcaccgactggacgatcggcacg ctgacgaaggtcttcgagacccgtcgggccggccagccggtcaaggcgtacccggcgctc gtggacgcgggcgagaccgtctccgtacggctcttcgacacggaggccgagcaggcggcg gcgatgtggcagggcacccggaagctgatcatgctgaacatcccggtgaaccccgcgaag ttcgcctcggacaagctcaccaaccagcagaagctggcgctctcccggaacccgcacggc aacgtccaggcgctgttcgaggactgtgcgacggcggcggcggaccggctgatcgcggat cacggaggtccggcttgggacgaggagtcgttccggaagctgttcgacaaggtccgcgcg gacctcgtcgagctgaccatccgcacggtcggacaggtgcagcagatccttgccgcctgg caggcctgtgagcgccgcctgaaggcgacgaacagcctggccctgatcaacaacgtgacg gacgtccggaaccagctcgcctggctcgtgccggccggcttcgtcacccgcacgggcctg cggcggctgccggacctgatgcgctatctggtcgcggccgaccgccgcctccagcagatg ccgacgggcgcgcagcgggacaccacccgcatggagaaggtccacgagatgctcgacgag tacgcctggctgctcgaacagctcccgaagggccgcccggtgccgaccgaggtcaccgac atccgctggatgatcgaggagctgcgggtgagctacttcgcgcacgcgctgggtacggcg tacccggtctcggacaagcggatcgtgaaggcgatcgacgcggcggcaccgtag

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