Streptomyces solicathayae: R2D22_22495
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Entry
R2D22_22495 CDS
T11073
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
ssli Streptomyces solicathayae
Brite
KEGG Orthology (KO) [BR:
ssli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssli03021
]
R2D22_22495
Transcription machinery [BR:
ssli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
R2D22_22495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
Sigma70_ECF
MarR_2
HTH_24
GerE
DUF7343
HTH_28
HTH_31
MarR
HTH_AraC
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
WOX24006
UniProt:
A0ABZ0LXW8
LinkDB
All DBs
Position
complement(4846178..4847050)
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AA seq
290 aa
AA seq
DB search
MSPRLDASRSPHAPSTTPPAAHDLPELAEIHSFEQVAPLDARALSKTLFARLEALEEGTH
EYAYVRNTLVELNLALVKFAASRFRTRSEPMEDIVQVGTIGLIKAIDRFDLSRNVEFPTF
AMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLARAGDELAQRLDRAPTVEELAAELGIG
HDEVVEGMAASNAYTASSLDAQPEEDETEGTLADRIGYEDHGLEGIEYVESLKPMIAALP
ARDRKILSLRFTAGMTQSEIGEELGISQMHVSRLLARTLGRLRKGLTLEE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgcctcgcgttccccccacgcgccgtcgacgactccgcccgca
gcgcacgatctcccggaactcgcggagatccactcgttcgagcaggtcgccccgctcgac
gcgcgcgccctgtcgaagaccctcttcgcccgcctcgaagcactcgaggaaggcacccac
gagtacgcctacgtccgcaacaccctggtggaactgaacctcgccctggtgaagttcgcc
gcctcccggttccgcacccgcagcgaaccgatggaggacatcgtccaggtcggcaccatc
ggcctcatcaaggccatcgaccgcttcgacctgagcaggaacgtcgagttcccgaccttc
gcgatgccgaccatcatcggcgagatcaagcgcttcttccgagacacctcctggtccgtg
cgcgtaccgcgccgactccaggaactccgcctcgacctggcccgggccggcgacgaactc
gcgcagcggctcgaccgcgcgcccaccgtcgaggaactggccgccgaactcggcatcggc
cacgacgaggtcgtcgagggcatggccgcgagcaacgcgtacaccgcgagctcgctcgac
gcccagcccgaggaggacgagaccgagggcacgctcgccgaccgcatcggctacgaggac
cacggactcgagggcatcgagtacgtcgagtccctgaagccgatgatcgcggcgctgccg
gcccgcgacaggaagatcctgtcgctgcggttcaccgcgggcatgacgcagtccgagatc
ggcgaggagctgggcatctcgcagatgcacgtgtcgcggctgctcgcccgcaccctcgga
cggctgcggaagggtctgaccctggaggagtga
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