Streptomyces solicathayae: R2D22_30540
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Entry
R2D22_30540 CDS
T11073
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ssli Streptomyces solicathayae
Pathway
ssli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
R2D22_30540 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssli03400
]
R2D22_30540 (ruvB)
Enzymes [BR:
ssli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R2D22_30540 (ruvB)
DNA repair and recombination proteins [BR:
ssli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R2D22_30540 (ruvB)
RecFOR pathway proteins
R2D22_30540 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
DUF815
nSTAND3
Sigma54_activat
AAA_14
AAA_3
RNA_helicase
Sigma54_activ_2
AAA_28
Zeta_toxin
TsaE
AAA_19
AAA_18
NPHP3_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WOX25479
LinkDB
All DBs
Position
6582680..6583762
Genome browser
AA seq
360 aa
AA seq
DB search
MNWDDDTDTGTGAERLVGAAADGEDQAVEAALRPKDLSEFVGQEKVRQQLDLVLRAARQR
GATADHVLLSGAPGLGKTTLSMIIAAEMNAPIRITSGPAIQHAGDLAAILSSLQEGEILF
LDEIHRMSRPAEEMLYMAMEDFRVDVIVGKGPGATAIPLELPPFTLVGATTRAGLLPPPL
RDRFGFTAHMEFYDPGELQRVIHRSAGLLDVEIDTEGAAEIAGRSRGTPRIANRLLRRVR
DYAQVRADGRVTREIAAAALGVYEVDGRGLDRLDRAVLEALLKLFGGGPVGLSTLAVAVG
EERETVEEVAEPFLVREGLLARTPRGRVATPAAWTHLGLVPPQAGGPGIQGSGQQGLFGA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
gtgaactgggacgacgacacggacaccggcaccggcgccgagcgcctcgtcggcgccgcc
gccgacggcgaggaccaggccgtcgaggcggccctgcgccccaaggacctcagcgagttc
gtcggccaggagaaggtccgccagcagctcgacctcgttctccgggccgcccgccagcgc
ggcgccaccgccgaccacgtgctgctctccggcgcccccggcctcggcaagacgaccctc
tccatgatcatcgcggctgagatgaacgcgccgatccggatcacctccggcccggccatc
cagcacgccggcgacctcgccgcgatcctctcctccctccaggagggcgagatcctcttc
ctcgacgagatccaccggatgtcccggcccgccgaggagatgctgtacatggcgatggag
gacttccgcgtcgacgtcatcgtgggcaagggccccggcgccaccgccatccccctggag
ctgccgcccttcacgctggtcggcgcgaccacccgggccggcctgctgccgccaccgctg
cgcgaccgcttcggcttcaccgcgcacatggagttctacgacccgggcgagctccagcgc
gtgatccaccgctccgccggactgctcgacgtcgagatcgacaccgaaggtgccgccgag
atcgccggccgctcccgcggcacgccgcgcatcgcgaaccgcctgctgcgccgcgtacgg
gactacgcgcaggtcagggccgacggccgggtcacgagggagatcgccgccgcggccctc
ggggtgtacgaggtggacggccgcggcctcgaccggctggaccgggccgtcctggaggca
ctgctgaagctgttcggcggcggcccggtcggtctgtccacgctcgcggtcgccgtgggc
gaggagcgcgagaccgtcgaggaggtcgccgagcccttcctcgtacgggagggtctgctg
gcgcgcacgccccgtggccgggtcgccactccggcggcctggacccatctcggactggtc
ccgccgcaggccggagggccgggaatccagggaagcggacaacaggggctcttcggggcg
tga
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