Streptomyces solicathayae: R2D22_31250
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Entry
R2D22_31250 CDS
T11073
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
ssli Streptomyces solicathayae
Pathway
ssli00260
Glycine, serine and threonine metabolism
ssli00630
Glyoxylate and dicarboxylate metabolism
ssli00670
One carbon pool by folate
ssli00785
Lipoic acid metabolism
ssli01100
Metabolic pathways
ssli01110
Biosynthesis of secondary metabolites
ssli01200
Carbon metabolism
Module
ssli_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ssli00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
R2D22_31250 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
R2D22_31250 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
R2D22_31250 (gcvP)
00670 One carbon pool by folate
R2D22_31250 (gcvP)
Enzymes [BR:
ssli01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
R2D22_31250 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF1805
SepSecS
Motif
Other DBs
NCBI-ProteinID:
WOX25611
LinkDB
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Position
6744718..6747603
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AA seq
961 aa
AA seq
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MTANRPPLSVLEQGIPFEQRHIGPDAEARAKMLAQVGYGSLDELTAAAVPDVIKSAEALG
LPAARTEAEVLAELRELADRNQVLAPMIGLGYYGTFTPPVILRNVMENPAWYTAYTPYQP
EISQGRLEALLNFQTMVADLTGLPTSGASLLDEGTAAAEAMSLSRRVGKVKNGVFLVDAD
ALPQTVAVIETRAEPTGVEVVVADLSAGIPAEIAERGVFGVLLQYPGASGAVRDIKPVID
QAHELGAIVTVAADLLALTLLTSPGELGADIAVGTTQRFGVPMGFGGPHAGYMAVQDKHA
RSLPGRLVGVSVDADGNRAYRLALQTREQHIRREKATSNICTAQVLLAVMAGMYAVYHGP
DGLKTIAQRTHRYAAILAAGLKAGGVELTTGAFFDTLTARVPGKADEVVAAAREAGVNLY
RADADHVSISCDETTGRAQLAAVWSAFGVAGDVEALDAVTEDALPVDALRSDVYLTHPVF
HAHRSETAMLRYLRKLADRDYALDRGMIPLGSCTMKLNATTEMEPVTWPEFGQIHPFAPV
EQAQGYLTLITELEERLAEVTGYDKVSIQPNAGSQGELAGLLAVRAYHRANGDEQRTVCL
IPSSAHGTNAASAVMAGMKVVVVKTADDGEVDVEDLRAKIAQYRDELSVLMITYPSTHGV
FEEHVADICAEVHEAGGQVYVDGANLNALVGLAKPGHFGGDVSHLNLHKTFCIPHGGGGP
GVGPVGVRAHLAPYLPNHPLQPTAGPETGVGPISAAPWGSAGILPISWSYVRLMGGEGLK
RATQVAVLAANYIAKRLEPHYPVLYTGPAGLVAHECIVDIRPLAKATGVSVDDIAKRLID
YGFHAPTMSFPVAGTLMIEPTESEDLTELDRFCDTMIAIRAEIEKVASGEWPADDNPLVN
APHTAAALGGEWNHAYSRDVAAFPAGVSAADKYWPPVRRIDGAFGDRNLVCSCPPLDEYD
N
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaaccgccccccgctctccgttctcgaacagggcatccccttcgagcagcgg
cacatcgggcccgacgccgaagcccgggccaagatgctcgcgcaggtcggatacggctcc
ctcgacgagctcaccgccgccgcggtgccggacgtgatcaagagcgccgaggccctgggc
ctgccggccgcccgcaccgaggccgaggtcctggccgagctgcgcgagctggccgaccgc
aaccaggtcctcgccccgatgatcggcctcggctactacggcaccttcacgccgccggtc
atcctgcgcaacgtcatggagaaccccgcctggtacacggcgtacacgccgtaccagccg
gagatctcgcagggccgcctggaggcgctgctcaacttccagaccatggtcgccgacctc
acgggtctgcccacctccggcgcctcgctgctcgacgagggcaccgccgccgccgaggcc
atgtcgctctcccgccgcgtcggcaaggtcaagaacggcgtcttcctggtcgacgccgac
gccctgccgcagaccgtcgccgtgatcgagacccgcgccgagccgaccggtgtcgaggtc
gtcgtcgcggacctctccgccggcatccccgccgagatcgccgagcgcggcgtcttcggc
gtgctgctccagtacccgggtgcctccggcgccgtccgggacatcaagccggtcatcgac
caggcccacgagctcggcgcgatcgtcaccgtcgccgccgacctgctcgccctcaccctg
ctcacctcgcccggcgagctcggcgccgacatcgccgtcggcaccacccagcgcttcggc
gtcccgatgggcttcggcggcccgcacgccggctacatggccgtccaggacaagcacgcc
cggtcgctgcccggccgcctcgtcggcgtctccgtggacgccgacggcaaccgcgcgtac
cgcctggccctgcagacccgcgagcagcacatccgccgcgagaaggccaccagcaacatc
tgtaccgcgcaggtgctgctcgccgtcatggcgggcatgtacgccgtctaccacggtccc
gacggcctgaagacgatcgcgcagcgcacccaccgctatgcggcgatcctcgccgcgggc
ctgaaggccggtggcgtggagctcaccaccggtgccttcttcgacaccctcaccgcccgc
gtcccgggcaaggcggacgaggtcgtcgccgccgcccgcgaggcaggcgtcaacctgtac
cgcgccgacgcggaccacgtctcgatctcctgcgacgagaccaccggccgcgcgcagctc
gccgccgtctggagcgccttcggcgtcgccggcgacgtcgaggccctcgacgccgtcacc
gaggacgcgctgcccgtcgacgcgctccgctccgacgtgtacctgacccacccggtcttc
cacgcgcaccgctccgagaccgcgatgctgcgctacctgcgcaagctcgccgaccgcgac
tacgcgctcgaccgcggcatgatcccgctcggctcctgcacgatgaagctgaacgcgacc
accgagatggagccggtgacctggcccgagttcggccagatccacccgttcgcgccggtc
gagcaggcgcagggctacctcacgctcatcaccgagctggaggagcgcctcgccgaggtc
accgggtacgacaaggtgtccatccagcccaacgccggttcgcagggcgagctggccggt
ctgctggccgtccgcgcctaccaccgcgccaacggcgacgagcagcgcacggtgtgcctc
atcccgtcctccgcgcacggcaccaacgccgcctccgcggtgatggccggcatgaaggtc
gtcgtcgtcaagaccgccgacgacggcgaggtcgacgtcgaggacctgcgcgccaagatc
gcccagtaccgcgacgagctgtccgtgctgatgatcacctacccgtccacgcacggtgtc
ttcgaggagcacgtcgccgatatctgcgccgaggtccacgaggccggcggccaggtgtac
gtcgacggcgccaacctcaacgcgctggtcggtctcgccaagccgggtcacttcggcggc
gacgtctcgcacctcaacctgcacaagaccttctgcatcccgcacggcggcggcggcccg
ggcgtcggcccggtcggcgtccgtgcgcacctcgccccgtacctcccgaaccacccgctc
cagccgaccgccggcccggagacgggcgtcggcccgatctcggccgccccgtggggctcg
gccggcatcctgccgatctcctggtcgtacgtccgcctgatgggcggcgagggcctcaag
cgcgccacccaggtcgcggtgctcgcggcgaactacatcgccaagcgcctggagccgcac
tacccggtgctctacaccggcccggccgggctggtcgcgcacgagtgcatcgtcgacatc
cgcccgctggccaaggccaccggcgtcagcgtcgacgacatcgccaagcgcctgatcgac
tacggcttccacgcgccgaccatgtcgttcccggtcgccggcacgctgatgatcgagccg
accgagtccgaggacctcaccgagctcgaccgcttctgcgacacgatgatcgcgatccgc
gccgagatcgagaaggtcgcctcgggcgagtggcccgccgacgacaacccgctcgtcaac
gcgccgcacaccgcggccgcgctgggcggcgagtggaaccacgcttacagccgcgacgtg
gccgccttcccggccggtgtctcggccgcggacaagtactggccgccggtgcgccgcatc
gacggtgccttcggtgaccgcaacctggtctgctcctgcccgccgctggacgagtacgac
aactga
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