Sediminispirochaeta smaragdinae: Spirs_0008
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Entry
Spirs_0008 CDS
T01287
Name
(GenBank) membrane protein insertase, YidC/Oxa1 family
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02024
Quorum sensing
ssm03060
Protein export
ssm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Spirs_0008
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Spirs_0008
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spirs_0008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ssm03029
]
Spirs_0008
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ssm02044
]
Spirs_0008
Mitochondrial biogenesis [BR:
ssm03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
Spirs_0008
Secretion system [BR:
ssm02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Spirs_0008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
60KD_IMP
YidC_periplas
Wzz
DUF7420
Motif
Other DBs
NCBI-ProteinID:
ADK79168
UniProt:
E1R6N6
LinkDB
All DBs
Position
5039..6796
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AA seq
585 aa
AA seq
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MDKRTLLAVILSTIVISVGFMIQNTFFAPPLPESPAVTEQAEASGNTNASDGSVSSNDNS
QQQPTAPVLQAQGIIPFGDEPGEKMVSLDTKVFKATFSSRGALLTSMKLKEHFENGEPLE
MIWRGNDAEGAFGISFGGPEREIAHVPFFVRNIDENTLEFYREFAVQTSSGPVPFTLTKR
FRFNPSDYLFEVLVKIENSVNAYPALDEDGYAYTLSFGPQIGPQVEKMDGRYAYRRYFTY
ENGKQKNYRMKNGSVSVDNRVSWAAVLGKYFAVIGVPDATDYDLLFTEGSEPGLPTTSRL
FFSRPPLKSSVSEDVFRFYMGPKISRVLTQYNDPDKNGFGTRDLHLEEVMDQGRLLGWLE
VIMKKLLVFFYSIIPNWGVAIILLTILVKVVLFPITHKSYESTSKMQMLQPKMKEIQDKY
RDNPNKMNQEMAELYKREKVNPMGGCLPMLLQMPMFIAMYGLFNKYFDLRGSSFIPGWIT
DLSSPESVYSFAPFKIPILGWSDIRLLPMFFVATMILSSKMTQSPSSAGSQNSSMKMMTY
MMPIFFFFFLYNAPSGLLVYWIVTNVLTIGQQKAISKIQKRKEEG
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaagaactttgctggcggttattctttcaaccattgttatttccgtcggtttc
atgattcaaaatacgttttttgctcctccccttcccgagtcaccggctgttacagaacaa
gccgaggcctccgggaatacaaatgcttccgatggatctgtttcatcgaatgataattct
caacagcagccgacggctcctgttttacaggcccaaggtatcattccttttggtgatgag
cctggggagaagatggtttctctcgacacaaaggtatttaaagcaaccttcagcagccga
ggggctcttttgaccagcatgaagttgaaagagcactttgaaaatggagagccgctggag
atgatttggcggggaaacgatgcagagggggctttcggtatatcttttggtggaccggaa
agagagatagcacatgttccgttttttgtccggaatatcgatgagaatacgctcgaattt
taccgtgagtttgcagtacaaacctcttcaggtcccgttcccttcactttgaccaagcgt
tttcggtttaatccttccgattatcttttcgaggtcttggttaagattgagaatagtgtg
aatgcctatccagccctcgacgaagatgggtatgcctacacgctatcctttggtcctcag
attggtccccaggttgaaaaaatggatggtagatatgcctatcgtcgttattttacctat
gaaaacgggaaacagaaaaattatcgaatgaaaaacggttctgtttccgttgataatcgg
gtaagttgggctgccgtacttggaaagtattttgcggttatcggggttcccgatgcaacc
gactatgatcttctttttaccgaaggttccgagcccggtttgccgacaacttcgcgactt
ttcttttccagacctcctctgaaaagcagcgtaagcgaggatgtttttcgtttttacatg
ggaccgaagatcagccgtgtcctgacacagtacaacgatccggataaaaatggcttcgga
actcgtgaccttcatcttgaggaggttatggaccagggccgtttgcttggctggcttgag
gtcataatgaaaaagttgcttgtcttcttttattcgattattccaaattggggtgtagcc
atcattctccttaccattttggtcaaggtcgtattgtttccgataacacataaaagctac
gaatcgactagtaagatgcagatgctgcagcccaagatgaaggagattcaggataagtat
cgggacaacccgaacaaaatgaatcaggaaatggcggagctttataaacgggaaaaagtg
aatcctatgggaggatgtcttcccatgcttcttcaaatgccgatgttcattgccatgtac
ggcctttttaacaagtatttcgatcttcgtggctcctcgtttattcccggttggattacc
gacctgtcgagtcccgaatcagtatatagttttgcacccttcaaaattccgattctggga
tggagcgatatacggttgcttcctatgtttttcgttgcaacgatgattctctccagtaag
atgacgcaaagtccctcgtctgcaggaagccagaacagtagcatgaagatgatgacctac
atgatgcctatctttttcttcttctttctctacaatgctccctccggtctgctggtttac
tggattgttaccaacgtgctgacgataggtcagcagaaggcaatctcaaagatacagaag
cgtaaggaggaagggtga
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