Sediminispirochaeta smaragdinae: Spirs_0053
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Entry
Spirs_0053 CDS
T01287
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
ssm02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_0053
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Spirs_0053
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_0053
Transporters [BR:
ssm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Spirs_0053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
GSH-S_ATP
Motif
Other DBs
NCBI-ProteinID:
ADK79213
UniProt:
E1R6T1
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All DBs
Position
57132..58085
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AA seq
317 aa
AA seq
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MRKVVLILLCGMLLGGTLFAGGQGEGEKVLQVAATFGDLGNPFFFTMGKGVEDAAKAIDP
NAKVTVQSSGYDLNTQTSQMENFIANGVDIIILNAADTAGIAPAVRKAKEAGIIVVAADV
NADGGVDATVTSNNYQAGTQAGEYIVKRLGGKGNIVIINGPPVSAVIDRVNGAKEVLAKN
PGIKILSDNQNAGGNREGGLRVMTDLLTAYDNIDAVFAINDPTGIGADLAIKQAKRGDEM
FVVGVDGAPDAVVALNDTNSSFVATPSQDPYTMATRAVQVAYEVIQGNPPKEKLILIPTT
LITRDNVSEYKGWTEPE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagtagtgctgatactgctttgtggcatgttgcttggcggaacactgtttgcc
ggtggtcagggagaaggtgaaaaagttcttcaggtggcggctaccttcggcgatcttgga
aatcccttcttttttaccatgggtaagggagtcgaagatgcagcaaaggcaattgatccc
aatgcaaaggtcactgtccaatcgtcgggctatgatctcaatactcaaaccagccagatg
gagaatttcattgcaaatggtgtggatattattatcttgaatgcggccgacaccgcagga
attgcacctgccgtacggaaagcaaaagaggctggtattatcgtggttgccgccgatgta
aatgcagatggcggagtcgatgcaacggttacctccaataattatcaggccggtacccag
gctggagaatacattgtaaagaggcttggggggaagggaaacattgtcattatcaatgga
cctcctgtatccgccgttatcgaccgggtaaacggagcaaaagaggttttagccaagaat
cctggaatcaagattctctccgacaaccaaaacgccggtggtaaccgtgaaggcgggctc
cgcgtcatgaccgatcttcttaccgcttatgataacattgatgcggtttttgccattaat
gatccaaccggtattggtgctgatttggcgatcaaacaggctaaacgcggtgatgaaatg
tttgttgtcggcgttgatggtgctcccgatgctgtggttgcgcttaatgacacgaacagc
tcttttgtagccaccccatcacaggatccgtacaccatggcgacgagggccgtgcaggta
gcgtatgaagtgatacaggggaatccccctaaagaaaaactgatccttatcccgaccaca
ttgattaccagggacaacgttagtgaatacaagggctggaccgaaccggaatag
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