Sediminispirochaeta smaragdinae: Spirs_0119
Help
Entry
Spirs_0119 CDS
T01287
Name
(GenBank) ABC transporter related protein
KO
K23537
general nucleoside transport system ATP-binding protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_0119
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_0119
Transporters [BR:
ssm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
Spirs_0119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_23
DO-GTPase2
AAA_22
AAA_15
AAA_29
AAA_13
AAA_16
DLIC
Motif
Other DBs
NCBI-ProteinID:
ADK79277
UniProt:
E1R8D3
LinkDB
All DBs
Position
124082..125605
Genome browser
AA seq
507 aa
AA seq
DB search
MAQDGAFALRMEGISKFFPGVIANDRINLDCRRGEVLGILGENGAGKTTLMNILYGLHQP
DEGQIFLDGKQVTIDSPSKAIDLGVGMVHQHFMLVEALSALENVILGMPSKRITLDIESA
RKRLETLCEDYELHVDPSVEVWKMPVGKQQWLEILKALYRDINLLVLDEPSSVLTPSEGK
QLFKAIRKITAEGRSVIFISHKLDEVLEVTDRITVIRDGRVVGTVETKDASQEELTRMMV
GRPVTITRKPRPVVTKDSPVLVMENVNADDDRGLPALKNFNLTVRAGEIVGVAGVDGNGQ
RELAECIVGMRKYTSGSVQIQDRLIDRIIADTSFVGYIPEDRQKTGLCLDMTVAENLIFK
EVDNPPYLKNGILRLNSIKEHAQNMIQKYDIRTRSGDDLVGNLSGGNQQKVIFAREINNE
PVLVIASQATRGLDLGAVENVHNVLLNERNRGAAVLFISTELQEVMSLSDRIIVMFRGEL
MGDVAGEGTDVSTIGRMMLGETLELDK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagacggtgcgtttgcattgcgcatggaaggaatttctaaattttttcctgga
gtgatagccaatgatagaataaatctcgattgtcgtaggggtgaggttcttggaattctt
ggagagaatggcgcaggcaaaacaaccttaatgaatattctatatggacttcaccagccg
gatgaaggtcagatatttcttgatggaaaacaagtaaccattgattctccttctaaagca
attgacttgggagtcggaatggttcatcaacatttcatgttggtggaagctctgtccgca
ttagaaaatgtgatactcggcatgccttccaaaaggataaccctggatatagagtctgcc
cgtaagcgtctggagactctatgtgaggattatgaacttcatgtagatccctctgtggaa
gtgtggaaaatgccggtgggtaagcagcagtggctagaaatcctgaaagcattatataga
gatatcaatttgctggtactcgacgaaccgagttctgttttaactccttctgaaggaaag
cagcttttcaaggcgatacgtaaaataacagcagagggccgctcggtaatcttcatcagc
cataaattggatgaagttctggaggtcactgatcgtatcacagtcattcgggatggtcgt
gtagttggtacggttgagacaaaggatgcaagtcaggaagaactgactcgtatgatggtt
ggtcgtcccgtgacaattacaaggaaacccagacctgtcgtgacgaaggatagtcctgtt
ctcgtaatggagaatgtaaatgctgatgatgaccgtggtctacctgccttaaaaaacttt
aacctgacagtccgtgctggtgaaattgtcggcgttgccggagttgacggtaatggtcag
cgggaattggctgaatgtattgtaggaatgcgtaagtatacgagtggttcggttcaaatc
caggaccgcctcattgatcggatcatagctgatacttcatttgtcggatatatacctgaa
gacagacagaaaaccggtctttgtcttgatatgacagtggcggaaaatcttatctttaag
gaagtagataaccctccatacttgaaaaatggtattcttcgcttaaattcaattaaagaa
catgcacagaatatgattcagaaatatgacatacggacacgatccggcgacgacctcgta
gggaatctctcgggagggaatcagcagaaagtcattttcgcaagggaaattaacaacgaa
ccggttttggtaattgcatctcaggcaaccagaggtttagaccttggtgcggtggaaaat
gttcataatgtgctgcttaatgaacgtaatcgcggtgctgcagtattattcatttctacg
gaacttcaggaggttatgtcgcttagcgatcgtattatagtgatgtttcgaggtgagttg
atgggagatgtagctggtgaaggaacggatgtttcaacgatcggcaggatgatgttagga
gaaactttggagttagacaaatga
DBGET
integrated database retrieval system
