Sediminispirochaeta smaragdinae: Spirs_0508
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Entry
Spirs_0508 CDS
T01287
Name
(GenBank) transcriptional regulator, IclR family
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
ssm
Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssm03000
]
Spirs_0508
Transcription factors [BR:
ssm03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Spirs_0508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
Rrf2
LexA_DNA_bind
TFIIE_beta
Dimerisation
HTH_45
HTH_micro
HTH_12
HTH_27
MarR
Motif
Other DBs
NCBI-ProteinID:
ADK79654
UniProt:
E1RBC4
LinkDB
All DBs
Position
complement(524921..525706)
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AA seq
261 aa
AA seq
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MSSDADKYTIKAVERSFEILDYISERNHPVSFQEITGALNLNNNMAFRLLASLQNSGYLQ
KDEGSNCYFISLKSLKLSRNALRSIELRKIAFPYMEMLWSQYPNANINIAVYYQGEVLVI
DRIDSQNLPRTYFTPGRVLPFHCSGLGKILTCTLPEEEINQLITEKGLKQYTVHTITSPE
ALKQELIKVRKEMVGRDRNEFISGDNCTAVPIFDKNRRIIAGLSASALESYMSAEEIDQM
FPKLQETAHRISAVMGYDDII
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgacgctgacaaatatacaatcaaagctgttgaacgcagttttgaaattttg
gattatataagtgaacgcaaccatcctgtttcgtttcaggaaatcaccggagccctcaat
ctaaacaacaatatggcgttcagactcctggcatctttgcagaattccggatatctgcag
aaagacgaaggatcgaattgttatttcatttccctcaaatcacttaaactttcccgcaat
gcccttcgatccatcgaactgaggaaaatcgcctttccatacatggaaatgctttggagc
caatatccgaatgcaaacatcaacatagccgtatactaccaaggcgaagttttggtcatc
gaccggatcgacagccagaaccttccccgcacatacttcacccccggtagggtattaccg
ttccattgctcgggattgggcaaaatccttacctgtacacttcccgaggaggaaattaac
cagctgataacggagaagggactcaagcaatatacagtgcataccatcacctctcccgaa
gcactcaaacaggagttgataaaagttagaaaggagatggtggggcgtgaccgcaacgaa
tttatctccggcgacaactgcaccgccgtccccattttcgacaaaaacaggcgtatcatc
gccggtctaagcgcatcagctcttgaaagctacatgagtgccgaggaaatcgaccagatg
ttcccaaaactgcaggagactgcacatcgcatatctgcagtcatgggctatgacgatatc
atttaa
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