Sediminispirochaeta smaragdinae: Spirs_0561
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Entry
Spirs_0561 CDS
T01287
Name
(GenBank) transcriptional regulator, IclR family
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
ssm
Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssm03000
]
Spirs_0561
Transcription factors [BR:
ssm03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Spirs_0561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR
HTH_IclR
HTH_24
HTH_5
MarR_2
HTH_20
MarR
DUF4423
TrmB
HTH_PafC
HTH_45
FaeA
HTH_Crp_2
HTH_11
TFIIE_alpha
HTH_AsnC-type
GerE
Sigma70_r4_2
LexA_DNA_bind
HTH_40
HTH_34
Motif
Other DBs
NCBI-ProteinID:
ADK79706
UniProt:
E1RBH6
LinkDB
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Position
586703..587458
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AA seq
251 aa
AA seq
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MADHGVIHTVVTASEILEYIAEKGGAQPAEIAKDLGLARANVHRHIATLYNLGFVEKRSD
GRCVLTFRLFELGNTVPHTRNLIDPARPAMLRLSQDTGQTVNHGILHEASVLFIDKVDAN
AYLMLERPIGTCQPLYCTSLGKVLLAFQPEAERERLISSLDLIRHTEHTITDRDRLREAL
NLIREEGFGCDFQEMTNELNCVAAPVFGSEGKIVSAISISAPVDHFDRAAIEAVVTSLTA
IADEVSRHMTR
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaccatggcgttattcatacagtcgtaactgcttcggaaattctcgaatatatt
gcggagaagggaggcgctcaacccgccgaaattgccaaggatcttggactcgcacgagcg
aatgtccatcggcatattgccaccttatacaacctcggctttgttgaaaagagaagcgac
ggcagatgtgttctcaccttcaggctctttgagctaggtaatacggttcctcataccaga
aatctgatcgaccccgcccgccctgcaatgctacgccttagccaggataccggacaaacc
gtaaaccacggtattctccatgaggcttctgttctgtttatcgacaaggttgacgccaac
gcctacctcatgcttgaacggccgatcggcacctgccagccgctttactgtaccagtctt
ggaaaggtgcttcttgcctttcagccagaggctgaacgtgaacggctgatctcctctctt
gatcttatccgccataccgagcacaccattaccgatcgagatcgtcttcgagaggctctg
aacctgatccgggaagagggcttcggttgtgacttccaggagatgaccaatgagctcaac
tgcgttgccgctcctgtattcggcagcgagggaaagatcgtttccgccatcagcatttct
gcgcctgtcgatcattttgatcgtgccgctattgaagcggtcgtaacctccctgacagca
atagccgacgaagtatcgagacacatgacccgttaa
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