Sediminispirochaeta smaragdinae: Spirs_0680
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Entry
Spirs_0680 CDS
T01287
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00521
Streptomycin biosynthesis
ssm00523
Polyketide sugar unit biosynthesis
ssm00541
Biosynthesis of various nucleotide sugars
ssm01100
Metabolic pathways
ssm01110
Biosynthesis of secondary metabolites
ssm01250
Biosynthesis of nucleotide sugars
Module
ssm_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Spirs_0680
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Spirs_0680
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Spirs_0680
Enzymes [BR:
ssm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Spirs_0680
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Motif
Pfam:
dTDP_sugar_isom
JmjC_2
Motif
Other DBs
NCBI-ProteinID:
ADK79820
UniProt:
E1RBU0
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All DBs
Position
715161..715703
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AA seq
180 aa
AA seq
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MPFEFQKTKISGVMIVKPRIFPDERGFFMETYKKSDFESAGICADFVQDNHSYSAFGVLR
GIHFQKASHAQGKLVHAVEGSVWDVAVDLRPSSPTFKQWVGITLNSEEGTMLYLPPGCGH
GFVVLSHTVHFLYKCTTEYAPQADGGIRWNDPDLAVAWPVDHPQVSEKDAALPFFSEVSL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgccttttgaatttcaaaaaacgaaaatctccggtgtaatgatcgtcaaaccccgtata
tttcctgatgaacgggggttttttatggaaacctacaagaaaagcgattttgagtctgca
ggtatctgtgcggactttgttcaggataaccattcctattccgccttcggtgtacttcgt
ggtatacacttccagaaggcctcccatgctcagggcaaattagtgcatgctgtggaaggt
agtgtctgggatgttgccgttgacctgcgaccttcatcccccacctttaaacagtgggtc
gggattaccctcaatagtgaagagggtaccatgttgtatctcccgccaggatgtggtcac
ggctttgtcgtcttatctcacaccgtccattttctctataaatgcacaacagagtatgca
ccccaggcggacggggggatcagatggaatgatcccgatcttgccgtcgcgtggcctgtg
gatcatccccaagtctctgaaaaagatgcagctcttccttttttctccgaggtttcacta
tga
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