Sediminispirochaeta smaragdinae: Spirs_0682
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Entry
Spirs_0682 CDS
T01287
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00521
Streptomycin biosynthesis
ssm00523
Polyketide sugar unit biosynthesis
ssm00525
Acarbose and validamycin biosynthesis
ssm00541
Biosynthesis of various nucleotide sugars
ssm01055
Biosynthesis of vancomycin group antibiotics
ssm01100
Metabolic pathways
ssm01110
Biosynthesis of secondary metabolites
ssm01250
Biosynthesis of nucleotide sugars
Module
ssm_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Spirs_0682
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Spirs_0682
01055 Biosynthesis of vancomycin group antibiotics
Spirs_0682
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Spirs_0682
00525 Acarbose and validamycin biosynthesis
Spirs_0682
Enzymes [BR:
ssm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Spirs_0682
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
KR
Motif
Other DBs
NCBI-ProteinID:
ADK79822
UniProt:
E1RBU2
LinkDB
All DBs
Position
716575..717645
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AA seq
356 aa
AA seq
DB search
MRQFTTILITGGAGFIGSNFIRYLFEKTDFKGNIVNLDALTYAGNPASLADIQARFGATR
YFFEKADICDAGSIEKVFQHYDPDAVVHFAAESHVDRSILGPGTFINTNILGTFNLLETC
RKMWEGRSDVLFHHISTDEVYGSLGESGYFSETTAYDPRSPYSASKASSDHLVRAYHHTY
SLPITLSNCSNNYGPYQFPEKMIPVMILNMLEDKPLPVYGDGKNIRDWLYVEDHNSAVWQ
IMCKGIVGSSYNIGGENEWENIHLVNKLCELTALQTGKDPDRYKKLIHYVKDRPGHDQRY
AIDCRKIKEELGWQQAFSFDEGLMHTVKWYLSNGSWIEGIKSGEYRRWMEQNYQGR
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagacaatttactaccattctgattaccggaggggctggatttatcggctccaacttt
atccgttacctttttgaaaaaacagatttcaaaggcaatatcgtcaacctcgatgcatta
acctatgcaggaaaccccgccagtttagcagatattcaggcacgcttcggggcaacacgc
tattttttcgaaaaggcggatatttgtgatgccgggagcatcgaaaaggtttttcaacac
tatgatcccgatgccgtggtccattttgccgccgaaagtcatgtcgaccgttcaatcctg
gggcctgggacctttattaataccaatatcctcggcaccttcaacctgcttgaaacctgc
cgcaagatgtgggagggacggagtgatgtgctctttcaccacataagcaccgatgaagtc
tacggatcgcttggcgaaagcggatacttcagcgagacaactgcctatgatccgagaagc
ccctattccgcgtccaaggcctcgtcggatcatcttgtcagggcctatcaccacacctat
agtcttcccatcaccctgtccaactgctccaacaactacggaccttatcaatttcctgaa
aagatgattcccgtcatgatcctcaacatgttggaagataaaccgctgccggtgtacggt
gatggtaaaaacattcgcgactggctttacgtagaagatcacaatagcgccgtatggcag
atcatgtgtaaaggaatagtcggttcttcctataacattggcggtgaaaacgaatgggaa
aatattcacctggtcaataagctttgtgaacttactgccctccagaccggcaaagatcct
gatcgttataagaagctcatccattacgtaaaagacagacccgggcatgaccagcgttat
gccatcgattgccgaaaaattaaggaggaacttggttggcagcaggcattcagcttcgat
gagggcctgatgcataccgttaagtggtatctaagcaacggctcctggatcgaaggaatc
aaaagtggtgaataccgacgatggatggagcagaactaccagggacggtga
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