Sediminispirochaeta smaragdinae: Spirs_0705
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Entry
Spirs_0705 CDS
T01287
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
ssm02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_0705
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Spirs_0705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_0705
Transporters [BR:
ssm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Spirs_0705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Imm30
Defensin_propep
Peripla_BP_3
MarB
Motif
Other DBs
NCBI-ProteinID:
ADK79840
UniProt:
E1RBW0
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All DBs
Position
732490..733497
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AA seq
335 aa
AA seq
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MKKTLTILAALLLVSSFVFANGAQETAEKKQMMGVVTPSADHGFTAESIRHCEAQVKALS
QKYGFDYHFMTAAESGEQSNAVETILVMKPDVMVLWPVNGDELRSAAQSVMDAGVPLIVY
DRFITGLTPDAEISGDNIAIGEKAGRYFNDYFKEDLANGQVNYLEFKGDSSTVPMERTNG
FLSTASGNFNLVQSFVTNWSQQTAMEQMENFLNTKSKDEIESVKAIFTHDDEIVFGIVEA
LKNYHGNAKINIRLVNGVSAGEGFMDLFENSGLEGIDFVTYTFSPSMVRDAVDLGLKVLQ
GETLEKSYKIPTDMVDKTNYKTYMESDLYKTRYGL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacactgacgattcttgccgccctgttgcttgtaagcagctttgtctttgcc
aacggtgcacaggaaacagctgaaaagaaacagatgatgggggttgtgacccccagtgcg
gatcatggattcactgcagaatccattcgtcactgtgaagcccaagtcaaggccctttcc
caaaaatatggttttgattatcacttcatgactgctgcagaatcaggagaacagagtaat
gctgtcgaaaccattcttgtaatgaaacccgatgtcatggtcctttggcctgtgaatggt
gatgaactgcgcagtgcggcacagtctgttatggatgccggggttcctttgattgtctat
gaccgttttatcaccggcttaacccccgatgctgaaatttccggtgacaatattgccatt
ggagaaaaagccggccgctatttcaacgactatttcaaagaagatcttgcgaatggacaa
gtaaattatcttgagtttaagggcgacagttcaactgtgccgatggaaaggaccaatgga
tttctctccaccgcaagtggaaacttcaaccttgtccaatccttcgttaccaactggagt
cagcagactgcaatggaacagatggaaaacttccttaatacaaagagtaaggacgaaatc
gaatccgttaaggccatatttacccatgatgatgagatcgtatttggtattgttgaagca
ttgaagaactatcacggcaatgccaagataaacattcgcctggtcaatggtgtttccgcc
ggagagggttttatggacctgtttgagaattccggtctggaaggtatcgattttgtgaca
tataccttttctccctccatggtccgggatgctgtcgatcttggtctgaaagtccttcag
ggggaaacacttgagaagagttacaagattcccaccgacatggtagataagaccaattac
aaaacgtatatggaaagtgatctctataaaacccgctacggcctctaa
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