Sediminispirochaeta smaragdinae: Spirs_0924
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Entry
Spirs_0924 CDS
T01287
Name
(GenBank) D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00260
Glycine, serine and threonine metabolism
ssm00270
Cysteine and methionine metabolism
ssm00680
Methane metabolism
ssm01100
Metabolic pathways
ssm01110
Biosynthesis of secondary metabolites
ssm01120
Microbial metabolism in diverse environments
ssm01200
Carbon metabolism
ssm01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Spirs_0924
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Spirs_0924
00270 Cysteine and methionine metabolism
Spirs_0924
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssm04147
]
Spirs_0924
Enzymes [BR:
ssm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
Spirs_0924
1.1.1.399 2-oxoglutarate reductase
Spirs_0924
Exosome [BR:
ssm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Spirs_0924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
RS_preATP-grasp-like
NAD_binding_2
F420_oxidored
XdhC_C
TrkA_N
UDPG_MGDP_dh_C
Motif
Other DBs
NCBI-ProteinID:
ADK80058
UniProt:
E1RCH8
LinkDB
All DBs
Position
976273..977226
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AA seq
317 aa
AA seq
DB search
MSFLVAQVDYDYPDTRIEREIIEAAGGELKSAHLRDEQELIDFAADADAVIVQYAPITRN
VLEHLPSCKIVSRYGIGIDNVDTIAAQELGIYVAHNPEYCIDEVSDHALAMIMTLQRQIA
SGTDLVKQGIWDFTKLTPIKASPQTTIGIIGFGHIGRRIAQKLQAIGFSCIAHDPYVAQE
TFDSHGVRRVALPYLMQHADCITVHCSLTDETKNLVDAAMIGLMKPEAYIVNTSRGPVID
VDALSLALRQGKVRGAALDVLPEEPPKSFEEIAHLPSLLLTPHIAFYSETAIVELRSSIA
RQVVQVMQNEPPQYNAY
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagttttcttgttgcgcaagttgattatgattaccccgataccaggatcgaacgggaa
atcattgaagcagccgggggagagctaaaatcggctcatctccgagatgagcaagagctt
atcgactttgctgccgatgccgatgccgttatcgtccaatatgccccaatcacccgtaat
gtgcttgaacaccttccctcttgcaagattgtcagccgatatggcattggtatcgacaat
gtcgataccatcgctgctcaggagctggggatctatgtcgcccataatcccgaatattgt
atcgacgaagtttccgaccatgcattggccatgatcatgaccctgcagaggcaaatagcc
tccggtaccgatcttgttaaacagggaatttgggattttacgaaactcacgccgataaag
gcttccccgcaaactaccattggcatcatcggcttcgggcatatcggccggagaattgcg
caaaaactgcaggccattggcttttcctgcattgcgcatgatccctatgtcgctcaggag
acattcgattcccatggtgtgcggagggtcgcccttccgtacctcatgcaacatgccgat
tgcatcacggttcactgttcccttaccgatgaaacaaaaaaccttgtagatgctgccatg
atagggctcatgaaacctgaggcctatattgtaaatacttccaggggaccggtcatcgac
gtagatgcgctttccctcgctcttcgtcagggaaaagtaaggggagcggcccttgatgtg
cttcccgaagagcctccgaagtcgtttgaggagatcgcccatttaccttctctgctgctc
actccccatatcgccttttattcggagaccgccatcgttgaattacgctcatcaattgcc
cggcaggttgtgcaggtaatgcaaaacgaacctcctcagtataacgcctactaa
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