Sediminispirochaeta smaragdinae: Spirs_1056
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Entry
Spirs_1056 CDS
T01287
Name
(GenBank) ABC transporter related protein
KO
K23537
general nucleoside transport system ATP-binding protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_1056
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_1056
Transporters [BR:
ssm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
Spirs_1056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
RsgA_GTPase
AAA_30
AAA_27
AAA_23
AAA_25
APC_r
Motif
Other DBs
NCBI-ProteinID:
ADK80189
UniProt:
E1R0U0
LinkDB
All DBs
Position
1103655..1105172
Genome browser
AA seq
505 aa
AA seq
DB search
MDTYETVLEMRGITKVFPGVVANDAINFDLRKGEVHALLGENGAGKSTLMGILSGVYQPT
EGSIVLEGAPVRFDSARDAIHNGIGMVYQHFMLVPKLTVAENIMLGIKRPKEPLLQIDKA
SEQIVAFARTYGMDLDPEQKVASLTVGQQQRVEIVKALFRGAKILVLDEPTAVLTPKEIQ
ELFSMIKMLTDQNFSVIFISHKIDEVIEISNRISVLRRGKLEATINNEGVSKEELAGLMV
GRDVSFCVEKTPCCPGDSVLALEGVGLKDREGRPLLKDVNFEVHEGEIFGVAGVDGNGQD
ELLEVITGLRSASEGSVCIVGQEVLGKSPRQILEMGLAHIPADRQARGLVLSMDIKENFI
INDYYRSPHSKRDIISWPFVRKHTKENIERFDVRTSSIDTPVSTLSGGNQQKLILARELH
GKPVLLAAMHATRGLDVGAIEYVHQRILEQRAAGTAVLYISTELEELMSFSDRIAVMFRG
EIMGIVRPEEVTIDQIGLMMAGSIT
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggatacatatgaaacagtcctggaaatgagaggtattaccaaggtttttcccggtgtc
gttgccaatgatgctattaatttcgatctacgaaagggtgaggtccatgcccttctcgga
gaaaatggggcggggaaaagtaccctgatgggcattctttccggggtttaccagccgacg
gagggatcaatcgtgttggagggggcccctgtccgtttcgattccgccagggatgccatt
cataacggtattgggatggtgtatcagcatttcatgctggtgccgaaactgacggttgcg
gagaatatcatgcttgggatcaagcggccgaaggaaccgcttctgcagatcgacaaggca
tcggaacagatcgtcgcttttgcccgtacatatggcatggatttagatccggaacagaag
gtcgcttccctcaccgtcggccagcagcagcgggttgagattgtaaaagcactctttcgc
ggggcaaagatccttgttcttgatgagcctacggcggtccttaccccgaaagagatccaa
gagctttttagtatgatcaagatgcttaccgatcagaacttttccgttatctttataagc
cataagatcgacgaggttattgagatcagcaatcgtatttccgtgcttcggcggggtaaa
cttgaagcaactatcaataacgagggagtttccaaggaagaattggctggtctcatggtc
ggccgcgatgtttccttctgtgttgagaaaactccctgctgcccgggggattccgtcctt
gctcttgaaggggtggggctaaaggaccgcgaaggtcgacctctcctgaaggatgtgaac
tttgaggtacacgaaggggaaatttttggggtagccggtgtcgatggaaacgggcaggac
gaattactcgaggtgataacgggtcttcgatccgcctcggaaggatcggtttgcatcgtc
ggtcaggaggtcctgggaaaaagcccccgccagatcctggaaatgggcttggctcatatc
cctgcggaccgacaagcccgcggccttgtgttgagcatggatatcaaagagaattttatt
atcaatgattattatcgctctccgcatagcaaacgggatatcatctcctggccctttgtc
agaaagcatacaaaggaaaacatcgagcgcttcgatgttagaacctcttccattgatacc
ccggtttcgaccctttcagggggaaaccagcaaaagctgattcttgccagggagcttcat
ggcaagccggtccttttggctgcaatgcatgccacccgggggctcgatgtgggggccatt
gaatatgtacatcaacggatactcgaacagcgtgcagcgggaaccgcggtcctgtatatt
tcgacagagttagaagagcttatgagcttttcagataggattgccgtgatgttcaggggg
gaaattatggggattgttcggcccgaagaagtgacaattgatcaaattgggcttatgatg
gcaggaagtataacgtaa
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