Sediminispirochaeta smaragdinae: Spirs_1057
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Entry
Spirs_1057 CDS
T01287
Name
(GenBank) transcriptional regulator, GntR family
KO
K03710
GntR family transcriptional regulator
Organism
ssm
Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssm03000
]
Spirs_1057
Transcription factors [BR:
ssm03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Spirs_1057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
UTRA
DUF2922
HTH_DeoR
MarR
DnaD_N
HTH_24
HTH_11
TrmB
HTH_36
Fe_dep_repress
MarR_2
DUF4423
TBPIP
wHTH-PRTase_assc
HTH_Crp_2
Rrf2
RepL
HTH_41
Ribosomal_S25
Phage_rep_O
Motif
Other DBs
NCBI-ProteinID:
ADK80190
UniProt:
E1R0U1
LinkDB
All DBs
Position
1105186..1105920
Genome browser
AA seq
244 aa
AA seq
DB search
MKEYGPQGKKFPKYKVIKHYLLQRIKEMVPGDNRLETEEVLSEKMGVSKATVRQAMDELI
SEDLITRQQGKGVFGHPRVGELKMHLGLWANFRDYLSRAGYRVSVTQSPFRVDIASKHMV
ARAPSLEGAHVYAFDWIYYANDKPVIVCRIEVPMDLVINPLQSEVPPLTLKESLKTLSGK
NFSYAISWIRSSLDREAARLFALDEMTAFLVWDENFFDLYDNHLCYNEILFHPDYLDFSI
ICHF
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagtatggaccacaaggaaagaagttcccaaaatataaagttatcaagcactat
ctgttgcagcggattaaggaaatggtgccgggagataaccgtttggaaacggaagaggtc
ctatcggaaaagatgggagtgagcaaggcgacggtccggcaggcaatggatgagctgatt
agcgaggacctaataacacggcagcagggaaaaggtgtattcggccatccccgagtcggg
gaattgaaaatgcatcttggcctctgggccaattttcgggattatctttcccgggcggga
tatcgagtgtccgtaactcaatctccgtttcgggtagatatcgcctcgaagcatatggtc
gcacgagctccctctcttgagggggcacacgtgtatgccttcgattggatttattatgcc
aacgacaaacctgttatcgtctgtaggatcgaggttcccatggatctcgttatcaatcct
cttcagtccgaggtgcctcctcttaccctcaaagagagcctgaagacgctgagcgggaaa
aatttttcctatgccatcagctggattcgcagttctcttgacagggaggctgccaggctc
ttcgctcttgatgagatgaccgctttcttggtatgggatgaaaattttttcgatttatac
gataatcatctttgttataatgagattctgtttcatcccgattatctcgatttttcgatc
atctgccatttttag
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integrated database retrieval system
