Sediminispirochaeta smaragdinae: Spirs_1202
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Entry
Spirs_1202 CDS
T01287
Name
(GenBank) Glycoside hydrolase, family 20, catalytic core
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00511
Other glycan degradation
ssm00520
Amino sugar and nucleotide sugar metabolism
ssm00600
Sphingolipid metabolism
ssm01100
Metabolic pathways
ssm04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
Spirs_1202
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
Spirs_1202
00511 Other glycan degradation
Spirs_1202
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
Spirs_1202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ssm03110
]
Spirs_1202
Enzymes [BR:
ssm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
Spirs_1202
Chaperones and folding catalysts [BR:
ssm03110
]
Intramolecular chaperones
Others
Spirs_1202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glyco_hydro_20b
Glycohydro_20b2
Motif
Other DBs
NCBI-ProteinID:
ADK80331
UniProt:
E1R2P9
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All DBs
Position
1266296..1268089
Genome browser
AA seq
597 aa
AA seq
DB search
MNLSLLVPQPQMVRSGSGNFRFDRDFEDQVRSYLFCDTLPEGITELSLPHELRTLPESYR
LDIRPDKILLATESKSGRFAAMTTLKQLLLQCPGAVLPCMTIDDWALFSIRGVMIDISRS
RVPTMNTLQHMIDLLSLLKYNQLQLYMEHTFAYKGHEDVWKDSSPLTEAEIRGLDLYCLR
RGIELVPNQNSLGHMERWLAHPAYKQYAECPEGFTDSWGFFRPVSTTLAPSCRESFLFLE
GLYDQLLPLFSSRLFNAGGDEPLEFGMGRSRMLCEREGRDNVYAAFLDRLHSLAAERGKR
LMVWADILQKYPHLLKDLPEDMIFVDWGYQEDHPFDDDCRNLAESGRDFIVCSGTSAWNS
IGGRWGNCRGNIRNAAAAALKWGALGIMVSEWGDNGHMQQYPIPMPGYFLGAATAWNPEA
IDLLDLSGALSLLLFGREQKVLAQALMLLEEAGSPNGVKIHNASLPGIMLFDHHLPHYRS
LLAQYAGYDFSFEYEQLEKAEALLASVEPGETRILYDEIRFTAALMHFACDLGHLRLQAP
HFLLSEIDTAARVKLADRLEKLIIEYRRLWLLRNRPGGLEESAGILEELVRLLRKQG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaatctctctttacttgttcctcagccacagatggtccgctccggttccgggaacttc
cgcttcgaccgcgattttgaggatcaagtccgttcttatcttttctgtgatacgcttcct
gaagggattacagagctttcccttccccatgagcttcggaccctgccggaaagctatcga
ttggatattcgtcccgacaaaattctccttgcaacagaaagtaaaagtgggcgctttgct
gccatgaccaccctcaagcagcttttgcttcaatgtcctggtgccgtacttccctgcatg
accatcgatgactgggcacttttctcgattcggggggtgatgatcgacattagtcgtagc
agagtacctacaatgaatacgctgcagcacatgatcgatctcctttctctcctgaaatac
aaccagcttcagctctatatggagcacacctttgcctacaaggggcacgaggatgtatgg
aaggactcttctccgctgacagaggcagagatcagaggacttgatctctattgcctaagg
cggggaatcgaactggtgcccaatcagaactcccttggtcatatggagcgatggcttgcc
catcctgcctataagcagtatgccgaatgccccgagggctttaccgattcctggggcttt
tttcgtcccgtctctacaacccttgccccatcctgccgggagagctttctctttttagag
gggctctacgatcagctactgcctcttttttcctctaggctgttcaatgcagggggtgat
gaacccttggagttcggtatgggtcgttctcgaatgctttgtgaacgtgaggggcgtgat
aatgtgtatgcagctttcctcgatcgactgcatagccttgctgctgagcggggaaaacgg
ctcatggtatgggccgatatcttgcaaaagtatcctcacttacttaaagatctccccgaa
gatatgattttcgtcgattggggctaccaggaggatcatcctttcgatgacgactgccgg
aaccttgccgaatccgggcgcgattttattgtctgttctgggacctctgcctggaactcc
atcggcggcaggtggggcaattgtcgaggaaatattcgaaacgccgcagctgccgctctc
aaatggggtgcccttgggatcatggtgagtgaatggggggacaatggccatatgcagcaa
tatccgatacccatgccgggctacttcctcggcgcggcgacagcgtggaatcccgaggct
atcgatctcctcgacctgagcggtgctctttcactcctattgttcggtcgggaacagaag
gtacttgcgcaggccctaatgctgcttgaagaggcgggaagccccaatggcgtgaagatt
cataatgcctctctccccggcatcatgttatttgatcaccaccttccccattaccgctcc
cttttggcccaatatgccggatatgatttttctttcgagtatgaacagcttgaaaaggcc
gaggccctcctggcctccgttgagcccggagagacgcgaatcctttacgacgaaatacgc
tttaccgctgccctgatgcactttgcctgtgatctggggcatttgcgcctgcaggctccc
catttcttactatcagagatcgatacggctgcaagagtgaagcttgccgaccgccttgaa
aagctcatcatcgaatatcggcgtttgtggctgctgcgcaatcgccccggaggcttggaa
gaaagcgccggaatcttggaagaactggtcaggctcctaaggaaacaggggtaa
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