Sediminispirochaeta smaragdinae: Spirs_1229
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Entry
Spirs_1229 CDS
T01287
Name
(GenBank) regulatory protein GntR HTH
KO
K02103
GntR family transcriptional regulator, arabinose operon transcriptional repressor
Organism
ssm
Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssm03000
]
Spirs_1229
Transcription factors [BR:
ssm03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Spirs_1229
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
HTH_24
TrmB
HTH_DeoR
HTH_11
TFIIE_alpha
DUF6932
RPA_C
HTH_41
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
ADK80356
UniProt:
E1R2S4
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Position
1299575..1300645
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AA seq
356 aa
AA seq
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MKKYEQVEHYILEKIESGRFPVGSKIPSEDELIERLQVSRNPVRRALENLMKDGVVYKIQ
GSGSFVKDVSIPQAIDLYAILPSESFNLESAIIEGMRKALDDNHHKHVHLILQRPGKNTM
EQIDILNLIPKDRKGGIIFLPAVSVNRAANRLLAANIRKFEKAQFPVIQVDNYIPEYEGN
YIITDHRKASCQMTEYLLSMGHKHIAVLYQNQHKPSVKLRLQGIKQAYEQQEIAPTMLHR
FDLSGKPITREFVEELLESGCSAAFGLECGFIYDLYRQCLSMGLEIPKDLSLCSFDNHSY
PPSERDFFAAVIQKLNTIGYYSVQILLDLINKKTQGNIELLINAQLHQGRSIGKIT
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatgaacaggttgaacactatattctcgagaagatcgaaagcggtaggttt
ccggtgggaagcaagattccttccgaagatgagcttattgaacggctccaagtgagtaga
aatcccgtacgccgtgcccttgaaaatctgatgaaggatggggtggtctataagattcag
gggagcggaagtttcgtcaaggatgtttccataccccaggcaatagacctttatgccatt
ctcccatccgaaagtttcaatctcgagtcagccatcatcgaggggatgagaaaggccctt
gacgataatcaccataagcatgtccatctgatcctccagcgtccgggaaagaataccatg
gaacagatcgacattctcaatctcatccctaaggatcgtaagggggggattatttttcta
cccgccgtttccgtcaatcgtgccgccaatcgtcttcttgccgcgaatatcagaaaattc
gaaaaggcacaatttccggttattcaggtggacaactacattccggaatatgagggtaac
tacatcatcaccgatcaccgcaaagcgtcctgtcagatgacggaatatcttttgtcgatg
gggcataagcatattgcggtcctctatcagaatcagcataagccgtcggtgaagcttcgg
ctgcagggaatcaaacaggcgtatgagcagcaggagatagctccgaccatgctacaccgc
tttgatctttccggaaaacctatcaccagagagttcgtcgaagaattgcttgagagcggc
tgcagcgcagcctttgggcttgagtgtggttttatctacgatctgtatcggcagtgcctc
tctatgggactggagattcccaaggacctttctctctgttcattcgacaaccatagctat
cccccttcagagcgcgatttttttgccgccgtcattcagaagctcaataccatcggatac
tattccgtacaaatactgcttgatttaatcaacaagaaaacccagggcaatattgaattg
ctgatcaatgcacagctacatcaaggacgaagcattggaaaaattacttag
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