Sediminispirochaeta smaragdinae: Spirs_1483
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Entry
Spirs_1483 CDS
T01287
Name
(GenBank) ABC transporter related protein
KO
K13896
microcin C transport system ATP-binding protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_1483
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_1483
Transporters [BR:
ssm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
Spirs_1483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
AAA_16
SMC_N
AAA_22
AAA_29
AAA_5
Mg_chelatase
nSTAND3
NACHT
DUF87
AAA_7
Sigma54_activat
Pox_A32
AAA_13
NB-ARC
ResIII
ABC_ATPase
SLFN-g3_helicase
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
ADK80610
UniProt:
E1R575
LinkDB
All DBs
Position
complement(1587789..1589402)
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AA seq
537 aa
AA seq
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MTSLLRIENVRIGFRRKERLRQVVHGIDLRLGEHESLAIVGESGSGKTVTAASILRLLGP
SAEYPSGKIYFREQELLRAPERTLLGVRGKEIGMIFQEPMSSLNPLQNIGRQVAESLFLH
GGTDSKQNRIRVVEMLRRVGLRNAETRLGAFPHQLSGGERQRVMIAMAIVNRPRLLIADE
PTTALDVTIQAQILDLLLDLKRELGMAMIFITHDLSIVGRIADRVVVMKEGKIVEEAETK
KLFASPTHPYTRLLIESEPAAAPPKRNTAPDERLLEIRNLKVHFPVKRGILKRTVDYIKA
VDGVSLSIPRGGSFGLVGESGSGKTSLGRALLRLIPSSGEIFLKGEPLHDLKGDELRPLR
RWMQPVFQDPFGTLSPRMCVTDIVGEGLRVHEKLSIPERQERVASALEEVGLDPGIGERY
PHEFSGGQRQRIALARALVLKPDLLVLDEPTSSLDRSIQFQVIELLLNIQAEHGLTYLFI
SHDLKVVRALCRSLGVMKQGVLVEQGDAEQVMKEPQQEYTRRLLETAFMLDQERRAT
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcgctgctacgcatagaaaacgtacggatcggctttcgccggaaagagcggctt
aggcaggtggtccatggcatcgatcttcggctcggagaacatgagagcctcgctatcgtc
ggagaaagcggatcgggaaaaacggttacggcagcatccatccttcgtcttttggggcct
tcggccgaatacccttccggaaagatctatttcagggagcaggagctgctccgcgcaccg
gaacggacactgctgggagtcaggggaaaagagatcggcatgattttccaggaaccgatg
tcgagcctcaatcccctccagaatatcggtaggcaggttgccgaaagcctcttcctccac
ggggggaccgacagcaagcaaaaccgcataagggttgttgaaatgctccgccgtgtcggc
ctcaggaatgcggaaacgcgacttggggcctttccccatcagctttcggggggagagcgg
cagcgagtgatgatcgccatggccattgtcaacaggcccaggcttttgattgccgatgag
ccgacaacagccctggatgtgacgatccaggcccagatcctcgacctgctccttgatctg
aagcgggagcttggaatggcaatgattttcatcacacacgacctctccatcgtcggaagg
attgccgacagggtcgtggttatgaaagagggaaagatcgtcgaagaggcggaaaccaag
aagcttttcgcctcccccacccatccctataccagactcctcatcgaatcagaaccagcg
gcagcccctccaaaacggaacacggcccccgacgagaggcttttggaaatcaggaatctt
aaggtccactttcccgtgaagcggggaatcctcaaaagaaccgtcgattatatcaaggcg
gtggacggcgtctctctttcgattccccgaggcggcagcttcgggctggtgggagaaagc
ggctcgggaaagaccagcctgggaagagcccttttgcgccttattcccagcagcggagag
atattcctgaagggagagccgctccacgacctcaaaggcgatgaacttcgcccccttcgc
agatggatgcagccggtctttcaggaccccttcggaaccctctctcccagaatgtgcgta
accgatattgtcggagagggtttacgtgtccatgaaaagctgagcatcccggaacgacaa
gaacgagttgcctccgccctggaagaggtggggctcgatccaggaatcggggagcgatat
ccccacgaattttccggaggacaacggcagcgcatcgcccttgccagagcccttgttctc
aagcccgatctcttggtgcttgatgaaccaacatcaagcctcgacaggtccattcagttt
caggttattgaattgcttttgaatatccaggccgaacatggacttacctatctcttcatc
agccacgacctcaaggtggtacgggccctttgtcgttctctcggcgtcatgaagcaggga
gtccttgtcgagcagggagatgccgaacaggtcatgaaagaaccacaacaggagtacacc
agaagattacttgaaacggcttttatgcttgaccaggaaagaagagccacatag
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