Sediminispirochaeta smaragdinae: Spirs_1709
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Entry
Spirs_1709 CDS
T01287
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
Organism
ssm
Sediminispirochaeta smaragdinae
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_2
AAA_16
AAA
FleQ
AAA_7
bpMoxR
Fe-ADH_2
AAA_29
AAA_22
nSTAND3
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
ADK80836
UniProt:
E1R671
LinkDB
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Position
1839494..1840855
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AA seq
453 aa
AA seq
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MQFHILIVDDEKNIREGLGKSLEMDGHKVFLAATGKDGWHIVTTEEVDLVITDLKMPEMG
GSDLLKKIVSSYPTVPVVILTGHGTIESAVSAIQDGAYDFLTKPVDLERLSHIVRRALSN
RELVIQNRNLQDELDRISRRSKFDKMIGKSPQMRKVMELIDQVAQTKASVLITGESGVGK
ELVADAVHFLSNRREKPFVKVHCAALSETLLESELFGHEKGSFTGAISRKKGRFELAHEG
TIFLDEIGEISQQVQIKILRVLQEKQFERVGGESTLEVDVRVVSATNRDLKAEIEAGTFR
EDLFYRLNVVNIHVPPLRERTEDIPLLASAFLKEFSEENGKQIEGIDPKARLTLYNYRWP
GNIRELRNCIESSVVMCKGQVITTDDLPPSVTQGAEDSLIRIPVGIAMEEAEKEIIRATL
NHEKGNKTRCAEVLGIGRKTLHRKIKEYGLEED
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttcatattttgatcgtcgacgacgaaaaaaacatccgtgaaggtcttggcaaa
agccttgaaatggacgggcataaggtctttctcgctgccacgggaaaggatggctggcac
atcgtcaccaccgaagaggtcgatctggtgatcaccgatctgaaaatgccggagatgggg
ggatctgatcttttgaaaaagattgtatcttcctatcctaccgtacccgttgtgattctc
accgggcatggtaccatcgagtctgccgtctctgccatacaggatggtgcgtatgacttc
ctgactaagcctgttgatcttgaacggctcagccatattgtcaggagggcccttagcaac
cgggaactggtcattcaaaacaggaacctccaggatgagctcgaccgaatcagccgtcga
agtaaattcgacaagatgataggaaagagccctcagatgcgcaaggttatggagcttatc
gatcaggtggctcagaccaaagcttccgttctcatcaccggtgagagcggtgtcggcaaa
gaactggtggccgatgccgttcatttcctttcgaaccggagagaaaagccctttgtgaag
gttcactgtgctgccttatcggaaaccttgctggagagcgaactgttcggccatgaaaag
ggttcctttaccggtgccatttcacggaaaaaggggcgatttgaattggcccacgaaggg
accatctttctcgatgagatcggggagataagccagcaggtccagattaagatccttcgt
gtacttcaggaaaagcagttcgagcgggtggggggagagtcgaccctcgaagtcgatgtc
agggtggtaagcgccacgaaccgggatctcaaggcggagatcgaggctggcaccttccgt
gaagatcttttttatcgtctcaatgtcgtcaatatccatgttccccccttaagggaacga
accgaagatatccccttgcttgcttcggcatttctgaaagaattcagcgaagagaatggc
aagcagatcgagggaattgatcccaaggctcgtcttaccctttacaattaccgatggccg
ggaaacattcgtgaactgaggaactgcatagaaagctccgttgtcatgtgtaaaggccag
gtcatcacgacggacgatcttcccccttctgttacccaaggggccgaagacagccttatc
cgtattcctgttggtattgctatggaggaggcggagaaagagattattcgcgctaccttg
aaccatgaaaagggaaacaaaacccgctgcgcggaggtcttgggtatagggcgaaagacc
ctacatcgaaagatcaaggagtatggcctggaagaagattaa
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