KEGG   Sediminispirochaeta smaragdinae: Spirs_1712
Entry
Spirs_1712        CDS       T01287                                 
Name
(GenBank) helicase c2
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
ssm  Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:ssm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssm03400]
    Spirs_1712
Enzymes [BR:ssm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Spirs_1712
DNA repair and recombination proteins [BR:ssm03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Spirs_1712
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII RadC Helicase_C DUF7260
Other DBs
NCBI-ProteinID: ADK80839
UniProt: E1R674
LinkDB
Position
1842244..1844673
AA seq 809 aa
MDTMKIGERLTVEAADYARNSIEEAEGNEVFFVGSFNGSGKVEFLEAVARGNEHAVPALA
PFVETGDVVIHNHPSGVLKPSGPDLRIASELGNRGIGFYIIDSGATRVYAVAEPARKRRI
VPLDAEKLSSLMTPGGLLSRIFSDYQMRDSQVQMMERIIEAFNSDEILLAEAGTGVGKSL
AYLIPSIAWAVANGERVVISTATINLQQQLIEKDIPLVRRLVKGEVKSVLVKGRGNYLCL
RRFEEALEENSLFREDTSELEAIRKWVSSTDTGSRSDLPFYPLRETWAKVCSETDACMGL
RCRHRESCFVLRARREAASANILVVNHHLLFSDLALRIEGAGFEGGAVLPAFNRLVFDEA
HTIERSATSFFSRSYQLPSLLKQLNRLRRSQGRRTFGSLVSLQKRSTRPELFERFPAFLS
KLKESAEKLDQLGLQLLSGTNSLRCQSLSSDELRQLLESMALVRSDITALITRIAAALES
VDTEDDDQDLFETKTILERLSNMASLLGSFRELTERPESVFWMEVRGSGERRFAVFNETP
LDIGPVMREAVYEPFKTLICTSATLTVNGQFSFWMGRVGLFSSEERLVAEIFPSPFRYRD
QVLLALPTDPPDPSSPGYQEYVNRFVRDAILTAGGSTLVLFTSYGMLNQTWEAVAPDLEA
EKIPVLRQGEDDRSRLMNAFVGNVSAVLFATDSFWEGVDAPGDALRMVIICKLPFRVPTE
PVLQARMEAIEAKGGNPFFMLSLPEAAMRLKQGFGRLMRKAEDHGVVAILDPRLTRKSYG
KIMLASLPETAVSRRDSTALMGQIEEFLF
NT seq 2430 nt   +upstreamnt  +downstreamnt
atggatacgatgaaaatcggggaacgactgacggtagaggctgctgattatgccaggaat
agtatagaagaggcggagggaaacgaggttttctttgtcggttctttcaatggctccggg
aaggttgagtttctcgaagcggtggcccgtggcaacgaacatgccgtacctgcgcttgct
cccttcgttgagaccggcgatgtggtgatccacaatcatccctccggtgttcttaaaccc
agtggccccgatcttcgcatcgcatcggaattgggtaaccggggaatcggtttttatatt
atcgatagtggtgccaccagggtctatgctgttgccgaacctgcccggaaacggagaatc
gttcccctcgacgctgaaaaattatcgtctctcatgactcccggaggacttctgtctcgt
atcttttccgactaccagatgcgggattcgcaggtacagatgatggaacgtatcatcgag
gctttcaatagcgatgaaatccttcttgccgaggctggaaccggggtcggtaaaagcctt
gcctatctcattccttctatagcctgggctgtggccaatggcgaacgggtagtcatctct
accgccacgatcaatcttcaacagcagcttattgaaaaggacattcccttggtgcggcgc
ctcgtaaagggggaggtgaagagcgttctcgtaaagggaaggggcaattacctctgcctt
cgtcgttttgaagaggctttggaggagaactcgctttttcgggaagatactagtgaactg
gaagcgattcggaaatgggtttcttccacggataccggaagccgaagcgatctcccattt
tatccccttcgggagacatgggcaaaggtgtgttccgagactgatgcctgcatgggctta
cgctgtcgtcatcgcgaatcctgcttcgttttacgggcccgtcgggaggccgcatcggca
aatatcctggtggtaaaccatcacctcctcttttcggatcttgccttacgtatcgaggga
gcgggctttgagggcggtgctgtcctgccggcctttaatcggcttgtttttgatgaagcc
cataccatcgagcgcagcgcaaccagttttttttcaagaagctaccagcttccctctttg
ctcaaacaactgaacaggcttcgccgcagccaggggcgccgaacctttggttcgctggtt
tccttacaaaagcggtcgacccggcccgagctttttgaacggttccccgcttttctttcg
aaactgaaagaaagtgccgagaaactcgaccaattgggcttacagcttctatcgggaaca
aactccttacgttgtcaaagcctctcttccgatgagctccgtcaactcctggagtcgatg
gcccttgttcgaagtgatatcaccgccctgattaccaggattgccgccgccttggagagt
gtcgataccgaggatgatgaccaggatctttttgagaccaagaccatcttggagcggctt
tcaaacatggcttctcttctcggctcatttcgagagcttacagagcgccccgaatcggta
ttctggatggaggtgaggggaagcggggaacgacgctttgccgttttcaacgagaccccc
ctggatatcggtcccgtgatgcgggaggcggtatatgaaccctttaagacattaatctgt
acctcggcaaccctgaccgtgaacggacaattttccttctggatggggagggtcggcctc
ttctcttccgaggaacgacttgtggccgaaatctttccctctcccttccgttatcgtgat
caggtactccttgcccttcctaccgaccctccggatccttcttccccaggctatcaggag
tatgtgaatcgttttgtcagggatgccatactgactgcgggtggaagcaccctagtcctc
tttaccagctacggtatgctcaaccaaacctgggaagccgtggcaccggaccttgaggcc
gaaaagatccctgttttgcggcaaggggaggacgatcgtagccgactcatgaatgccttt
gtgggaaatgtctcggctgtcctttttgccaccgattccttctgggagggggttgatgcc
cccggtgatgctctacgtatggtcatcatctgtaaacttccctttcgtgtaccaaccgaa
ccggttctccaggctcgcatggaggccatcgaggcaaagggcggaaatccctttttcatg
ctgagtcttccggaggcggccatgcgtctgaagcagggctttgggaggctcatgagaaag
gccgaagatcacggagttgtggcgatactggacccgagactgacaagaaaaagttacggc
aagattatgcttgcaagccttcccgagacagcagtaagccgaagggattccacggctctc
atgggtcagattgaagagttccttttttag

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