Sediminispirochaeta smaragdinae: Spirs_1862
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Entry
Spirs_1862 CDS
T01287
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10543
D-xylose transport system substrate-binding protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_1862
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_1862
Transporters [BR:
ssm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
Spirs_1862
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
ADK80988
UniProt:
E1R6H0
LinkDB
All DBs
Position
2019420..2020445
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AA seq
341 aa
AA seq
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MKKLTKVLSVLLMICTGLNVFAAGNQETSDGIVIGVSLPTQREARWVRDKETMEAYAEEL
GIDLRMAVADADMAQQASQVENLLAQQVDVLILAPHDASASASLVKRSVAEGVPVISYAR
LIRDTSDISLFMAIDPEEVGRLQGKFLVDTVGPGNYILMAGAPTDYNATLFFNGAMEYIK
PMVDSGEINVVAEQAVENWLPANALAIVENALTAANNKVDAILAPNDGTAGGAIVALEAQ
GLVGQVVITGQDAEVAAMKRIVAGTQTMSVLKDTRILGKAAIDAAVKIAQGETPDTHGST
IDNGAGEIPALLIPPIVITKDNLDEVVINSGYLERSQVYGE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaagctaaccaaggtacttagtgttttgttgatgatctgtacaggacttaatgtt
tttgcagcaggaaaccaggaaacgagtgacgggattgtcatcggtgtctctcttccgacg
cagagagaggctcgttgggtgcgcgacaaagagacaatggaagcctatgccgaagagctc
ggcatagatctacgtatggctgttgccgatgcggatatggcccagcaggcttctcaggtt
gaaaacttgcttgcgcaacaggttgatgtactcattcttgccccgcatgatgcctcggcc
agtgccagtcttgtgaaaaggagcgttgcggaaggtgttcctgttatttcctatgcgaga
ttaattcgggacacttctgatatctccctctttatggcaattgatcccgaagaagtaggc
cgtttacaggggaaattccttgtcgataccgtcggccctggaaactacattcttatggca
ggagctcctaccgattataatgccacgctttttttcaatggggcgatggagtatataaag
ccgatggttgactctggggaaatcaatgttgttgccgaacaagcggtcgagaactggctt
cccgcgaatgcgctcgcaattgtcgaaaatgctttaactgctgcgaataataaggtagat
gccattctcgcccctaacgacggtaccgcaggtggggcaatcgttgctctggaagcccaa
gggcttgtcggccaagttgtgattacaggacaagatgctgaagtggccgcaatgaagcgc
attgttgcggggactcagacaatgtcggttctgaaagataccagaattcttggaaaggcg
gccattgatgctgcagtaaaaatcgcacagggagaaactcctgatacccatggttctacc
attgacaacggcgcaggcgagattcctgcgcttctgattcccccaattgttattacaaag
gataatcttgatgaagtagttatcaacagcggttatctggagcgatcgcaggtatacgga
gagtag
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