Sediminispirochaeta smaragdinae: Spirs_1977
Help
Entry
Spirs_1977 CDS
T01287
Name
(GenBank) single-strand binding protein
KO
K03111
single-strand DNA-binding protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm03030
DNA replication
ssm03430
Mismatch repair
ssm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spirs_1977
03430 Mismatch repair
Spirs_1977
03440 Homologous recombination
Spirs_1977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssm03032
]
Spirs_1977
03400 DNA repair and recombination proteins [BR:
ssm03400
]
Spirs_1977
03029 Mitochondrial biogenesis [BR:
ssm03029
]
Spirs_1977
DNA replication proteins [BR:
ssm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Spirs_1977
DNA repair and recombination proteins [BR:
ssm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Spirs_1977
TLS (translesion DNA synthesis) factors
Other SOS response factors
Spirs_1977
Mitochondrial biogenesis [BR:
ssm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
Spirs_1977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
Pro-rich
PriC
Motif
Other DBs
NCBI-ProteinID:
ADK81099
UniProt:
E1R1F8
LinkDB
All DBs
Position
2133113..2133715
Genome browser
AA seq
200 aa
AA seq
DB search
MANDITSFTAVGRLTRDAELRYTNSGIPLCKFSIASNYSRKVHDNWQEEVSYFDFTLFGK
RAEALAQYLTKGQQVVVSGQLRQDRWEDNGEKRSRVAFFAQDVQLIGGKPAGQSNQQGQY
GEAPYQGPPQNQRGGYSQQPPQQRQQQNSRQGQQRRQGPPPNSGYQKPTGGYDQWGYPIN
PGPNNQGPDQEMDFEDDIPF
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgatattaccagtttcacggcggtcggaaggcttacccgtgatgcagagttg
cgatatacgaacagcggaataccgttgtgtaagttcagcatagcatcgaattacagcagg
aaggtgcatgataactggcaggaggaagtcagctatttcgatttcaccctattcgggaaa
cgtgctgaggcgcttgctcagtatctcaccaaaggtcagcaggtggtggtttcaggacag
ctgagacaagaccggtgggaggacaatggggagaagcgaagcagggtagcgttctttgcc
caggatgtacagctgattgggggaaaacctgccggccagagcaaccagcaggggcagtat
ggagaggccccctatcagggaccgccgcagaaccagcggggcggctattcccagcagcct
ccacagcaaaggcaacagcagaattcccggcagggtcagcaacgtcgacaggggcctccg
cctaactccgggtatcagaagccgacaggcggctatgatcagtggggctacccgataaac
cccggaccgaataatcagggcccggatcaggaaatggacttcgaggacgacatacccttt
taa
DBGET
integrated database retrieval system
