Sediminispirochaeta smaragdinae: Spirs_2027
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Entry
Spirs_2027 CDS
T01287
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
ssm
Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssm03021
]
Spirs_2027
03009 Ribosome biogenesis [BR:
ssm03009
]
Spirs_2027
Transcription machinery [BR:
ssm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Spirs_2027
Ribosome biogenesis [BR:
ssm03009
]
Prokaryotic type
rRNA transcription factors
Spirs_2027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
Zn_ribbon_3
S1
Zn_Ribbon_1
UPF0547
KH_NusA_C
DUF7129
DZR
HHH_5
KH_2
Zn_ribbon_DZR_6
Zn_ribbon_15
Zn_Ribbon_TF
Zn_ribbon_DUF2089
zf-Mss51
zf_UBZ
Motif
Other DBs
NCBI-ProteinID:
ADK81149
UniProt:
E1R1K8
LinkDB
All DBs
Position
2180866..2182356
Genome browser
AA seq
496 aa
AA seq
DB search
MAAGLAEAIRSLVQDRGISEELVRKTIEDFLLAAYKRKFGTTENAVVRFSEDGNEVAIFA
AKEIVENVEDPVTEMPLKEALTYNEECEIGDELLIEINPKEFDRVAVQSAKQKAKQTLRE
IQKDTLYSEFKEKEGEMVIGYYQRERNGNIFVDLGKIEGILPRRYQSPREVYRPNDRIKA
LIYEVSKSPSGLQIVLSRTHTDFVKRIFELEVPEVYDKTVEIFKIVREPGYRTKIAVYSN
RDDVDPVGACVGMKGVRIQAVVRELEGEKIDILKYDIDARSFIKNALSPAEVQNVVILDE
AKRQALAVVEENQLSLAIGKQGLNVRLANRLVDWNIDVKTIEQFEEMDLSAETKKELNAL
FNDVEEDDENVEEISRISELPGISERLSEILMQNGVELIETLVGLSGEDLSRLEGVTVQD
VETIQNIISENVDIIEEQEEEAIAQTESHEHLAEETYECPECGHPITIDMTSCPNCGVGL
SFEVEDDNDEDEEEEE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggccgctggtttggcagaagcaatccgctccctggttcaagatcggggaatatcggaa
gaactggtaaggaaaaccattgaggattttctccttgccgcttataaacgcaaatttggt
actacggagaatgccgttgtacgttttagtgaggatggtaacgaggtagcgatttttgct
gcaaaagaaattgtcgaaaatgttgaagatcctgttacggaaatgcctctaaaagaggca
ttgacctataatgaagaatgtgaaatcggtgatgagctgcttattgagataaatccgaaa
gagtttgatcgtgttgccgtccagagtgcaaaacagaaagcgaaacaaacattacgggaa
atccagaaggataccctctattccgaattcaaggaaaaagagggagagatggttattggt
tattatcaacgtgaacgtaacggcaatatctttgtcgatcttggtaaaatcgagggaatt
cttccccgacgctaccaatcccctcgggaggtatatcgccccaatgatcgtatcaaggcc
cttatttacgaggtaagtaaatccccctctgggctccaaatcgttctgtcgagaacccac
accgattttgtgaagcgtatctttgaactggaagttccggaggtatacgacaaaaccgta
gagatctttaaaattgtacgtgagccgggatatcggaccaagattgctgtctactcaaac
agggacgatgtagatcccgttggtgcatgtgtcggtatgaaaggcgtgcgtatccaggcc
gtggtacgagagcttgaaggtgaaaagatcgatatcctgaaatacgacattgatgctcgc
tccttcattaagaatgcactcagcccagccgaggttcaaaacgttgtcatccttgatgag
gcaaaacgtcaggctttggccgtggtggaggagaatcagctttctctcgccatcggaaag
cagggcttaaatgtgcgtcttgcaaatcgtcttgtcgactggaatatcgatgtaaagact
attgagcagtttgaagagatggatctctccgctgagacaaagaaggagctaaatgcgctc
tttaacgatgttgaagaggatgatgagaacgtcgaggagatcagtcgtatttcggagctt
ccgggtatcagcgaacgactgtcggaaatcctcatgcaaaacggcgttgaacttatcgag
accttggtcgggctttcgggagaggatctttcaagactggaaggcgttacggtacaggat
gtcgaaacgatacaaaacattatttccgaaaatgtcgacatcatcgaggagcaggaagag
gaagccattgcccagaccgagagccatgagcacctcgccgaggaaacatacgagtgtccc
gaatgcggacacccgattaccatagatatgacctcttgcccaaactgcggcgtaggttta
agctttgaagtcgaagacgacaatgatgaagacgaagaagaggaggaataa
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