Sediminispirochaeta smaragdinae: Spirs_2030
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Entry
Spirs_2030 CDS
T01287
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssm
Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssm03016
]
Spirs_2030
Enzymes [BR:
ssm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Spirs_2030
Transfer RNA biogenesis [BR:
ssm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Spirs_2030
Prokaryotic type
Spirs_2030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ADK81152
UniProt:
E1R1L1
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All DBs
Position
2185309..2186208
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AA seq
299 aa
AA seq
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MRSSGLILIDKPEGVTSFGALYPIKKRLGRGIKVGHTGTLDKFASGLLVVCAGSYTRLAG
FITTEDKSYEATILFGSQTDTLDPEGRVIHQAPLPCRDKLFSVIHDFTGNILQKPPLFSA
LHVKGERAYKRALRGEAVEMVPRPVTIHNLEITAFDGEKAVIRVTCSKGTYIRSLARDLA
LAAGSCGYLLSLRRTQLGRFAVCDAVAPELFDPDRHLSGGYQWFSDMQEHFAVARVDELM
HRRITNGIMPPQTFLSKVFTNEEEGVSERHYLLFSEEGALAASLNRSEKGFAFDFVVGT
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ttgagatcctctgggcttattcttatagataaacccgaaggagttacctctttcggagcg
ttgtatccaataaaaaaacgactcggaagaggaataaaagtcggtcacacagggacactt
gataaatttgcctctggcctgctcgttgtgtgtgccggaagctatacacggcttgctggt
tttatcacgacggaagataaaagttacgaagcaaccattcttttcggcagccaaaccgac
actctcgaccccgaagggcgcgttattcaccaagcgccgctcccttgtcgtgataagctt
ttttccgtaattcatgactttactggtaatatattacagaagccgccgcttttttcggca
cttcatgtaaagggagagcgggcctataaacgggcgctacgcggagaagctgtggagatg
gttccacgacctgtgacaatccacaatcttgaaatcacggctttcgatggggagaaagcc
gtaatcagggtaacgtgttcaaaaggaacctatatacgatctcttgccagagaccttgcg
cttgctgccggatcttgtggctaccttctctcccttcggaggactcaactgggacggttt
gcggtttgcgatgcggtcgccccggagctctttgatcccgatcgccatctatcaggtggt
tatcaatggttctccgatatgcaggagcacttcgccgttgctcgtgtcgatgagctcatg
cacaggcgtatcaccaacggaattatgcctccacagacttttctctccaaggtatttacg
aacgaagaggaaggggtttcggagcgacattacctccttttttccgaagaaggagcactt
gctgcttctctcaatcgtagcgaaaaggggtttgcctttgactttgtggttggaacatag
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