Sediminispirochaeta smaragdinae: Spirs_2072
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Entry
Spirs_2072 CDS
T01287
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00550
Peptidoglycan biosynthesis
ssm01100
Metabolic pathways
ssm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Spirs_2072
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Spirs_2072
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssm01011
]
Spirs_2072
Enzymes [BR:
ssm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Spirs_2072
Peptidoglycan biosynthesis and degradation proteins [BR:
ssm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Spirs_2072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ADK81194
UniProt:
E1R308
LinkDB
All DBs
Position
complement(2235367..2237235)
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AA seq
622 aa
AA seq
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MTGFSGPQDSTVRKSRVLVLGFIFGLLVLIYLLYLFNMQVVHTIFYQDRAKAVAMRSFTV
PAQRGEIFDRNADYPLATNIDSFAVYIIPAQLPADNRNAVFERLGRVLNMPESAIEKKIP
ARASQYFQPIEVKSGVDLATVTRIAERVEDFPGVTWNSKSIRNYNDIGSLSHILGYVGNI
TVEELQVLYNQGYNINSVIGKSGIEKGYDTLLRGKDGRSFSTVDVRGRQIGGIEDRFEAP
ENGKNLVLTVDKRIQKLCEEALGDRMGSAIVLKPATGEIIAMVSYPWFDPNLFYTDTSDE
AFRTLSLDPHNPFLNRAIQSANPPGSTFKIIMTTAALEEHAIDPQKTITCEGRFRLGDRY
FNCHLLHGHGPLNLKEALEESCDVYFYTLGLRHLGIDIISEYAKLFGFGSVSGIDIPGEI
AGLVPTPQWKQQRFNSPWVGGDTVNLSIGQGYLLVTPIQLANAVAMTVNQGVIYRPHFLK
EVRDPTSGETVRVVDPVAYKTAPISKETFKTVQENMRGVITDGTAAVVITTKAVDVAGKT
GTAEVGYDDRWHAWFAANGPYGAPPEDQLVVVTMVEASNDWEWWAVRAANIIFQGIFAHQ
TYDEALKALHWGWLHNDRRKEN
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtttttccgggccccaagactcaacagtccgcaagtcgagagttcttgttctg
ggattcatcttcggcctgctcgtgttaatctatcttctgtatcttttcaacatgcaggta
gttcatacgattttttatcaagatcgcgcaaaggccgttgccatgcgttcatttacggta
ccggcccaacgtggtgagatttttgatcgtaatgccgattatccgcttgcgacaaacata
gactcctttgccgtatatatcatccctgctcagcttccggcggataaccgaaatgctgtg
ttcgaacggcttggaagggtactgaatatgccggaatctgctattgaaaagaagattccg
gctcgagcatctcagtactttcagcctattgaggtgaaaagtggagttgatctcgcaacg
gtcaccagaattgccgaacgtgttgaagactttcccggcgtcacctggaacagcaagtcc
attcgaaactacaatgacatcggctctctttcacacatcctcggttatgtgggcaacatc
accgttgaggaactacaggtcctctacaatcagggatacaatatcaattctgtcatcggc
aaaagcgggatagaaaaaggctacgataccttgcttcgaggaaaggatggacgttccttt
tctacggttgatgtcaggggccgccaaatcggcggcatcgaagatcgcttcgaagcccct
gaaaatggcaaaaacctcgtacttaccgttgataagcgcattcagaaactgtgtgaagaa
gccctcggtgacaggatgggatcggccattgttctcaagcctgccaccggcgaaattatc
gccatggtttcctatccttggtttgacccaaatcttttttacaccgacacatctgacgaa
gcctttcggaccttgagccttgacccccataacccatttctcaatcgagcaatacaatct
gcaaatcctccgggctcaacctttaagattattatgactaccgctgcactggaggagcat
gccatcgatcctcagaaaacgataacctgcgaaggacgttttcgccttggcgatcgctac
ttcaactgtcacctgctccatggccatgggccccttaatctgaaagaggccctggaggaa
agttgtgatgtctatttttatactttaggcctacgacatttggggatcgatatcatttcc
gaatatgccaaactgttcggttttggttcagtttccggaattgatattccgggagagata
gcaggtctcgttcccactccccagtggaaacagcaacgttttaacagtccctgggtcggt
ggtgacacggttaacctttcgattggacagggttacctcttggttacaccgattcagttg
gcaaatgctgtagcgatgaccgtcaatcaaggcgttatttatcgtccccatttcctcaaa
gaggtaagagaccccaccagcggcgagaccgttagggttgtcgaccctgtggcatacaaa
acggctccgatcagcaaggagaccttcaaaacggttcaggaaaatatgcggggggttatc
acggacgggacggcagccgttgtaatcacaacaaaggctgtcgatgtagctggtaagaca
ggaacggccgaggtaggctatgacgaccgatggcatgcttggtttgcagcaaacggtccc
tacggtgctccgcctgaagaccagctggtagtagtgaccatggtcgaagcatccaatgat
tgggaatggtgggctgtcagggcagccaacatcatcttccagggaatcttcgcacatcaa
acctatgatgaggctctgaaggcccttcactggggatggcttcataatgatcgcaggaag
gagaattag
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