Sediminispirochaeta smaragdinae: Spirs_2290
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Entry
Spirs_2290 CDS
T01287
Name
(GenBank) HhH-GPD family protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Spirs_2290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssm03400
]
Spirs_2290
Enzymes [BR:
ssm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Spirs_2290
DNA repair and recombination proteins [BR:
ssm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Spirs_2290
Prokaryotic type
Spirs_2290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
DUF5817_CT
Dimerisation
HTH_IclR
HTH_Cmi2_C
Rrf2
Motif
Other DBs
NCBI-ProteinID:
ADK81405
UniProt:
E1R1M9
LinkDB
All DBs
Position
complement(2451785..2452591)
Genome browser
AA seq
268 aa
AA seq
DB search
MEKDDFRRLIYEFYKKNRRSFPWRETNDPWLILLSEMMLQQTQTSRVATKWESLAGRFPN
PQTMADVELAELLSLWSGLGYNRRALALKKIAERVVSTGGSLPDTYDGLVALPMIGPYTA
KAVLAFAYNRPVVFIETNIRRIFIHHFFPDQEKVTDRQILPLVEETLDRKDPRNWYYALM
DYGSALRGVENPNRRSAHYSRQSTFEGSDRQKRGALLRLLTASQGRARSCEELSTDINAD
PEKTMQLLSALVREGFVAESPEGYRIPS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggatgattttcgccgtcttatctacgagttctacaaaaaaaacaggcgcagc
tttccctggagagaaacaaacgatccgtggctgattctgctttccgaaatgatgcttcag
cagacccagacaagcagggttgctacaaaatgggagagccttgccgggcgttttcccaat
cctcagactatggcagatgttgagcttgcagagctccttagcctgtggagcggccttggt
tataatagacgggcccttgccctcaaaaagattgccgaacgtgtggtttcaaccggtggt
tctttgccggatacctacgacgggctcgttgcgcttccgatgatcggtccctacacggca
aaggcggtgcttgcctttgcctacaacaggccggtggtttttatcgaaacgaatatccgt
agaatctttatccaccacttttttcctgaccaggagaaggtaacggaccgccagatcctt
cccctggtggaggaaacccttgatcgaaaggatcctcgcaactggtattatgccttaatg
gattatggttcggccctccgtggcgttgagaatccgaaccgaagaagtgcacattacagc
aggcaatcgacctttgagggctccgacaggcagaaaagaggcgctctgctccgcttgctg
acggcctcccaaggcagagccaggagctgcgaggagctttctaccgatatcaatgccgat
ccggagaagacaatgcagcttctttccgcccttgtccgagaggggttcgtagcggaaagc
cccgagggctatcgaataccttcgtag
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integrated database retrieval system
