Sediminispirochaeta smaragdinae: Spirs_2465
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Entry
Spirs_2465 CDS
T01287
Name
(GenBank) MutS2 family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Spirs_2465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssm03400
]
Spirs_2465
DNA repair and recombination proteins [BR:
ssm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Spirs_2465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
KR
DUF7562
Prp18
Motif
Other DBs
NCBI-ProteinID:
ADK81579
UniProt:
E1R3E8
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All DBs
Position
complement(2656274..2658676)
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AA seq
800 aa
AA seq
DB search
MEKTVELLEFDKIRKELSARCFSEEGRTLLSGQRILTKRRECESLHDDVAALRVLMEQFR
ELPALSFPSITEALKELARPGSFVDGEHLYPIARYIQSAAILQDYVQEGSQELFPPQSKA
AVFPAHLLELLQRLDPPRELASRIFSVLEADGSVKENHPELRTIRKRLGALRRELMEMSS
RYMNESKDLWQNDVPSQKDGRLVLPLKAQRRGAVKGIIHDVSSKGAILYLEPFDILEKNN
EVAIQEHELHQVVIKILRELSALVRDRLESLETLIPVIAEIDVIQARSRLSRYYQGIRPM
IVDEGIRLKRARHPLLGLDAVPIDIELGGSVRSLIISGPNAGGKTVTLKTIGLLVLMHQF
GIEIPAAEESELPVFRAVYADIGDDQSIEASLSTFSGHMRTIADIISLAQAHTLVLLDEL
GSGTDPAEGSVLAMAILEELIEKDALTVSTSHHGLLKNFGYTRSGAMNASMDFDESSHMP
TYRVISGIPGESHAFAIAQRSGMPQGLLDRAEHYRQESAGEVGTMIRELESQTSRLRSEE
QRLNQREKRLREEVRENDLKELRLRRRENELRKEGYRSLDAFMHETRRELENLVRELREG
EINRDKTLKVKEFIGTIEERSHNEKELYEKEQKRLLVPEDRHQEEAFSDFPLEEGQTVFV
SNYQKQGVLIRKEKRDRWIVAIGPMKLPVAEKELRAVKAQQKGGRQKVAVSYDAPSAGQR
ASFVLDLRGMRLQEAIDALIKQIDAALVQGLREFSVIHGTGEGILQRGIHDYLRGHKAVE
SYEFAHPDDGGAGKTVVRLG
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaacagttgagctattagaattcgacaaaatacgaaaggaactttcagcccgt
tgttttagtgaagagggacgaacgctcctttccggacagcgtattctgacaaagcgtcgc
gagtgtgaatcgctccatgatgatgtagctgccctacgagttctgatggagcagtttcgg
gagttacccgctctctcttttccctcaattacagaggctcttaaagagcttgccagacca
ggatcgtttgttgatggcgaacatctctatcccattgcacgttatatccaatcagccgct
atcttgcaggactatgtacaagaggggagtcaggagctttttcctccccagtcgaaggcg
gcggtgtttcccgcacatctgctcgagctattgcagcgccttgatcctccccgtgaactt
gcttcccgcatcttttcggttttggaagcggatggaagtgtgaaagaaaatcacccggag
ttgcgtacgatacgaaagcgtcttggtgctttacgacgggaattaatggagatgagttcc
cgctatatgaacgaaagtaaggacttatggcaaaatgatgtgccaagtcagaaggatgga
cggcttgtccttcctctgaaggcgcagcgtcgcggggcggtaaagggcattattcatgac
gtttcttccaaaggggctatcctctacctcgaaccctttgacattctcgagaaaaataac
gaggttgccatccaggaacatgagctgcatcaggttgttatcaagatcctacgagagctt
tccgcccttgttcgcgaccgcctggagagccttgagacgctcattccggtcatcgcagag
attgatgtcattcaggcccgatcacgcctttcccgctattatcaggggattcgccctatg
attgtcgacgagggaattcggctcaaacgggccagacatcctctactgggccttgatgcg
gttcctatcgatatcgaactggggggatcggtacgttccttaatcatttccggtcccaat
gccgggggaaaaaccgttaccctgaagaccatcggcttattggtactgatgcatcaattc
gggatagagattcctgcggccgaagagagtgaattaccggtctttcgtgccgtctatgcc
gatataggcgacgatcagtcgatagaggcatcactttctaccttttcagggcacatgagg
accatcgcggatatcatatcgcttgcccaggctcacaccttagttcttctcgacgaattg
ggatcaggtaccgatcctgccgagggatcggtgcttgccatggcgattcttgaggagctg
attgaaaaagatgccctgacggtgtcaaccagccaccacggcttgttgaagaatttcggc
tatacccgatcgggggcaatgaacgcttccatggatttcgatgagtcttcacacatgcct
acctaccgtgtgatttccggaatccccggtgaaagccacgcctttgcgattgcacaacgc
agcggtatgccccagggcttacttgatcgagccgaacactaccggcaggaatctgccggc
gaggtcggtaccatgatccgggaactcgaatcacagacttctcgtctccgtagtgaagaa
cagcgccttaatcagcgtgagaaacgtctacgggaagaggtgcgggaaaacgatctgaag
gaactccgtcttagaaggcgggagaacgaactgcgaaaagaggggtatcgtagtctcgat
gccttcatgcatgagactcgacgtgaacttgaaaaccttgttcgtgagttgcgtgaaggg
gagataaacagggataagaccctcaaggtaaaagagttcatcggcacgatcgaggaacgt
tcccacaatgagaaggagctgtacgaaaaggagcaaaaacgtcttctggtacccgaagat
cgacatcaggaggaagcgttttccgattttccgctcgaggaggggcagaccgtgtttgtc
tcaaactatcaaaaacagggagtactcataagaaaagagaaaagggatcgttggatcgtt
gcgattggcccgatgaaattgcctgttgcggaaaaagagcttcgagccgttaaagcccag
cagaaagggggacggcagaaagttgccgtaagctatgatgccccatctgccggtcagagg
gcctctttcgttctggatctccggggaatgcgacttcaagaggccatagacgctcttatc
aagcagatagatgcggcacttgttcagggtttgagggagttttccgtgatccatggtacc
ggtgaagggatcttgcagcggggaatacacgattacttgagaggccataaggccgtggaa
tcctatgaatttgctcatcccgacgatggaggggcgggcaaaacggtggtacgactggga
tga
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