Sediminispirochaeta smaragdinae: Spirs_2683
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Entry
Spirs_2683 CDS
T01287
Name
(GenBank) ribose ABC transporter, substrate binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
ssm02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_2683
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Spirs_2683
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_2683
Transporters [BR:
ssm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Spirs_2683
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
ADK81790
UniProt:
E1R8N3
LinkDB
All DBs
Position
complement(2873341..2874387)
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AA seq
348 aa
AA seq
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MKRIGLIFLVVVLCLPFIACHKSSERSAAKADEQQAASDNSSAPEITIGCCVMDMANEIF
VQYVEGYKAFCEATGNKVKLIVVDGSSQPERQVEALENFISVGVDAIMLNALDLSAVEDV
VHRAMDSGIKVGIYPSMDGVTMNFVFDEYQWGFSLGVAAGNWINDELAGKAVVACFNQAE
LETALGRYYGYVDGVLSVCKKENITFLEPISTVEPVSAMEGMENILQAHPDAKVVLCSAD
AAAVGAYQAIVGAGIDTSKMFLGGCDGISEALGYIAKGSVFRATCANQYLVQDMGFALLQ
KLTKACLGMDYDGDYIAPTFLVDKTNVAEYMSREPEYTLDDDLAAVFR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaataggtttaatttttttggttgttgtcttgtgcctgccttttattgcatgt
cacaaatcatctgagcggtctgctgccaaggctgacgaacaacaagccgcatcagacaat
agtagtgcaccggaaattactattggctgttgtgtgatggatatggcaaatgaaattttt
gtccaatacgttgaaggctataaagccttttgtgaagccaccggtaataaagtaaagctt
attgttgttgatggttcttcgcaaccggagagacaggttgaagcacttgagaattttatc
agtgttggcgttgatgcgattatgcttaatgcactggatttaagtgcggttgaagatgta
gtgcatcgggcaatggattccggtataaaagtgggtatctatccttcaatggatggagtt
acaatgaactttgtatttgatgaatatcagtggggattcagtcttggtgttgctgcaggt
aactggatcaacgatgaactggctggaaaagctgtagtagcttgtttcaaccaggctgaa
cttgagacggcattgggacgttactacggttatgtcgatggcgtactttctgtttgtaag
aaagagaacataacgttcttggagcccatttcaacggtagagccggtttctgcaatggaa
ggaatggaaaatattctgcaggcacatcccgatgccaaagttgtcctttgttctgcagat
gcagctgcggttggggcataccaggcaattgtaggtgcgggtattgatacaagcaagatg
tttttaggtgggtgtgacggtatttcagaagctcttggttatatagcgaaaggctctgtc
ttccgagctacgtgtgcaaatcagtatttggtccaggatatgggattcgctttgctccag
aaactcacaaaagcctgccttgggatggattacgatggtgactatattgctccaaccttc
cttgtagacaaaacaaatgtggctgaatacatgtcacgggagccggaatatacgcttgat
gacgatttggccgcggtgtttcgataa
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