Sediminispirochaeta smaragdinae: Spirs_2861
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Entry
Spirs_2861 CDS
T01287
Name
(GenBank) ABC transporter related protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
ssm
Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ssm03012
]
Spirs_2861
Translation factors [BR:
ssm03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Spirs_2861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_16
AAA_28
AAA_30
RsgA_GTPase
ABC_tran_CTD
AAA_18
AAA_15
NACHT
AAA_22
AAA_23
nSTAND3
AAA_24
AAA_27
MukB
DUF815
CdaS_N
HrpB7
HA
Motif
Other DBs
NCBI-ProteinID:
ADK81964
UniProt:
E1R279
LinkDB
All DBs
Position
3059577..3061535
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AA seq
652 aa
AA seq
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MISLQLSEISLAFGDRDILRDVTLTLDGYSRTALTGANGSGKSTLMKIICGDITPDGGRV
IASRGMRIGYLPQSGLLYKGRNLIDEAETAFERHLVQIHRKEELEELLASSDESDPGLKT
ILEEHHAIVEELIREDYDRRFEAIERVLIGLGFSRDQFDAPCETFSGGWQMRIALAKVLL
GRPHIVLLDEPTNYLDLEARGWLEQFLKDYPGGVLLVSHDRYFLDATVKEVVEVFDGSLK
RYRGNYSEYETVRKEELVSLMAAWEKQQEEIAKLEEFIARFRYNASKAKLVQSRVKQLEK
INRITIPETLKKIHFSFPPPPHSGKEMLRIGGLNKGYGEHLVVKQLDLLLLRGEKVVIAG
PNGAGKSTLLRILAGIDHHYEGSVEYGTDVSIGYFAQDREEFAGSTATVIEEMEASAPSP
IIPQLRNLLGAFLFRGDDIYKRIEVLSGGEKSRLSLMKLLLQPHNLLILDEPTNHLDLHS
KDVLLDALRQYEGTVIFVSHDRGFIEHLATRVIELSAGERARNFPGDYEYYLWRKEQETA
DGETAAQHDDSPPFSKQEEEIPREGKLSWEEEKRIKNMVKELRREEERLLSEIERLESKA
GELKSRLERPEVYSDPVSVRDVQALIEKNDRELQLFSQKWEETAETLSVYEP
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcttcaactctcggagatatcccttgcctttggcgatagggatatccttcgg
gatgtgactctcaccctcgacggatacagccgtaccgctcttacgggagcgaacggtagc
ggaaagtcaacgctcatgaagatcatttgcggcgacatcaccccagacggcggtcgagtc
attgcttcaaggggcatgcgaatcggctatctgccgcaatcggggcttctctataaagga
agaaaccttatcgatgaagcggagacggcctttgaacgtcatcttgttcaaatccatcga
aaagaagagctggaagaactccttgcctcatcggatgagagcgatcccggcctgaaaacg
attttggaagagcaccacgcaattgtcgaagaacttatcagagaagattacgaccgtcgt
ttcgaagccatcgagcgggtcctgatcggtctcggattttcacgggatcagtttgatgcg
ccctgcgaaaccttttccggcggatggcagatgcgtatagccctcgcgaaagtgctgctc
gggcgtccccatatagtacttcttgacgagccgacaaactatctggaccttgaagcacgg
ggatggttggagcaattcctgaaagattacccaggtggagttcttttggtcagtcacgac
cgctatttccttgatgccacggtcaaggaggtcgtagaggtgttcgacggaagcttaaag
cgttaccgaggcaactacagcgaatacgaaacggtcagaaaggaagagttggtatcgttg
atggctgcctgggaaaagcagcaagaagagattgcaaagctggaagagtttatcgccagg
tttcgctacaatgcaagcaaggcgaagttggtccagagccgcgtcaagcagcttgagaaa
attaaccgtataacgatcccggaaacccttaaaaagatacatttctcctttccccctcct
ccccactcgggtaaggaaatgttacggatcggagggctcaataaggggtacggagagcat
cttgtcgttaagcaactcgatctactgcttttacggggagaaaaggtggtcatcgcaggt
cctaacggagcaggaaaaagtacgcttttgcgtatccttgcagggatcgaccaccattac
gagggatcggtcgagtacgggaccgatgtaagcatcggttattttgcccaggatcgcgag
gaatttgcagggtcgacggccacggtaatagaagagatggaggccagcgcgcctagcccc
atcattccacagctacgaaatctgttgggagccttccttttccggggtgacgatatctac
aaacgaatcgaggttcttagcggcggagaaaagagcaggctctctctcatgaaactccta
ctgcaaccccataatctgctcattctcgacgaacctaccaaccatctcgaccttcattcc
aaagatgttcttcttgatgcccttaggcaatatgagggaacggtcatcttcgtctctcac
gaccggggatttatcgaacaccttgcaacaagggtcatcgaactttcagcgggagagcgt
gcaaggaatttcccaggggactatgaatactacctctggcgtaaagagcaggaaactgcc
gatggggaaactgccgcacagcatgacgattctcctccgttttctaaacaagaagaagag
attccccgggaaggaaagctgagctgggaagaggaaaaacgcataaaaaatatggtaaag
gaactaagaagggaagaagagcgtcttttgtccgaaattgaaaggcttgaatccaaggcg
ggagagctgaagtccaggctggaacgccccgaagtgtatagcgacccggtcagcgtgcgg
gatgtccaggctcttatagaaaaaaacgaccgggaattgcagctcttctcacaaaaatgg
gaagagacggccgaaacgctaagtgtatatgagccctga
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