KEGG   Sediminispirochaeta smaragdinae: Spirs_2978
Entry
Spirs_2978        CDS       T01287                                 
Name
(GenBank) transcriptional regulator, GntR family
  KO
K03710  GntR family transcriptional regulator
Organism
ssm  Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:ssm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssm03000]
    Spirs_2978
Transcription factors [BR:ssm03000]
 Prokaryotic type
  Helix-turn-helix
   GntR family
    Spirs_2978
SSDB
Motif
Pfam: GntR UTRA HTH_24 HTH_Crp_2 HTH_IclR wHTH-PRTase_assc TrmB DnaD_N HTH_11 Rrf2 MarR Fe_dep_repress HTH_36 HTH_41 HTH_DeoR RepL DUF4984 SWIRM HTH_46 MarR_2 DUF4423
Other DBs
NCBI-ProteinID: ADK82080
UniProt: E1R3V9
LinkDB
Position
3188754..3189482
AA seq 242 aa
MNKRQTKSPPLYLKIREYLLKAIQNMQAGNNRLETEEALSEKLGTSRATVREAMASLIRE
GYITRWQGKGNFGHPAVTKLPMRIDINSDFLKLIADSGEKPQLLKRNLRNQRASQRMLRR
MPEVDDMEVTAFDWIYLDSRGPVIICDVELPHAYLRTPPSLEGNEQKLSAFLERHCRVHI
TYTTTWLSSTVDEAVADRFGIEQNRSMVVWEEIFYDLSDHRICFNTIYFHPDRIDLSMLL
TI
NT seq 729 nt   +upstreamnt  +downstreamnt
atgaataagagacagaccaaaagcccccccctctacctgaaaattcgcgagtatcttcta
aaagcgattcaaaacatgcaagccggcaataatcgacttgaaacggaagaagcgttgtcc
gaaaaattgggaaccagccgggcaaccgtcagggaggctatggcctcgctaattcgtgag
ggatacattacccgctggcagggaaaaggaaacttcggccaccctgcggtaacgaaactg
ccgatgaggatcgacatcaacagcgactttctcaagcttatcgccgattcgggggagaag
ccgcaactgctcaagcgcaatttgcgcaaccagagggcctcacagcgaatgctcaggaga
atgcccgaggtagatgacatggaagtaacggcattcgattggatctatcttgacagcaga
ggtcctgtcatcatctgtgatgtcgaattgccacatgcatatctacgaacgccaccgagc
cttgagggaaacgagcaaaaactttcggcatttttggaacggcattgccgcgttcacatc
acatacaccacaacatggctttccagtaccgtcgatgaagcagtagccgatcgattcggg
atagagcaaaaccgctcaatggtggtctgggaggaaatcttctacgacctttccgatcat
cgtatatgcttcaatacgatctattttcatcccgatcgaatcgatctttcgatgctcctg
accatttga

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