Sediminispirochaeta smaragdinae: Spirs_3026
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Entry
Spirs_3026 CDS
T01287
Name
(GenBank) Extracellular solute-binding protein, family 7
KO
K11688
TRAP-type transport system periplasmic protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Spirs_3026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_3026
Transporters [BR:
ssm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Spirs_3026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Replic_Relax
Motif
Other DBs
NCBI-ProteinID:
ADK82127
UniProt:
E1R4N9
LinkDB
All DBs
Position
complement(3241201..3242199)
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AA seq
332 aa
AA seq
DB search
MKQVPVYINILLFCILCSGSLFAQNRPVLRISVENTETHVQTLYVRRFSELLSERLEGSV
EVRFFDSAQLFRDSEVVGAIARGDLEMAVPGTWQLSRYVPEIGYLLLPDFFGAERMGTDR
FLESDMGRELLTRIEYNLNVIVPGKWMDLGAAHIFTTRKQIQRFDDFVGCRIRVAGGVAN
KMRVEVFGATGVIISWPDLPPRIRDGTVDGLLTTFETIRSAALWKDGIRFAFLDYEYFPQ
YVPIVSTHFWGLLTSNQQRIFRETWDELALQQRGAAAQAQTEAMEVAQKSGIIITVPSDL
EIHKAHMVLQDHRSQIIRELGIDPDFIELEDR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagtgcccgtatacatcaatatccttttattctgtatcttatgttccggatct
ttgtttgcacaaaaccgaccggtattgcgaatttctgtggagaatacagagacccatgtg
cagaccctgtatgttcgtcgtttttccgaactcctctcagagcgtttggaaggttctgtc
gaagtacgtttttttgattccgcacagttatttcgcgatagtgaagtggttggtgccatt
gcccggggagatctggaaatggcggtacccggcacctggcagcttagtcgttatgttcct
gagatcggatatctcctgttgccggatttttttggggcggaacgcatggggacggatcgt
tttctcgaaagcgatatggggcgtgagcttcttactcgaatcgagtacaatcttaacgtt
attgtaccgggtaaatggatggatttgggtgcagcccatatctttacaacccgtaagcaa
atacaacgtttcgacgattttgtcgggtgccgtattcgggtcgctggtggggtagcgaat
aagatgcgggtagaggttttcggtgccaccggcgttattatttcatggccggatctgcct
ccccgtattcgcgatggaacggtggatggcctgcttaccacttttgaaacgatacgaagt
gctgcgctttggaaagacggaattcgatttgcatttcttgattatgaatattttcctcaa
tatgtgcccatcgtatccacacatttctgggggcttttgacctcgaatcaacagcgaatt
tttcgagagacctgggatgaacttgctctccaacagcggggagcagcagcccaggcacag
acggaagctatggaggttgcccaaaaaagcggcattatcattactgtgccttcggacctg
gaaatacataaagcgcatatggtcttacaggatcatcgctctcaaattatccgtgaatta
ggaattgatcctgatttcatcgaacttgaggatcggtag
DBGET
integrated database retrieval system
