Sediminispirochaeta smaragdinae: Spirs_3029
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Entry
Spirs_3029 CDS
T01287
Name
(GenBank) inner-membrane translocator
KO
K10440
ribose transport system permease protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_3029
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_3029
Transporters [BR:
ssm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Spirs_3029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Ribophorin_II_C
Motif
Other DBs
NCBI-ProteinID:
ADK82130
UniProt:
E1R4P2
LinkDB
All DBs
Position
complement(3244971..3246002)
Genome browser
AA seq
343 aa
AA seq
DB search
MTEIVDKRRPRKRISLSDVLMKLGPLLALFILGIAMGIATPKFVNYYNFMNILKQTSINF
MISAGMLVVLITAGIDLSVGSTTALATCIMGVLVKSGVHNVCILIVSAMAVAIAVGYING
ILLTKLHLPHPFVSTLGTRSIVLGVALLITDATPIGFINKDVDSLLLLGSKTIFGFPISF
IAVIIVVVIYHIFLNKTMLGRQLYCVGGNPEAARLSGINSDKVLTIAYTISGAMTGIAGI
IMAGRVSTASATAGATFDMDSIASCIIGGASFMGGKGTIFGVLIGSLLISTIRNGLNLLG
AQNDIQYIVIGAVIIVAVLIDVTRGQMEQRARRIAQEKVIEER
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaatagttgacaagagaaggccgcgaaagcgaattagtttgtctgatgtatta
atgaagcttggtccgcttttggcattattcattttggggattgccatgggaatagcaact
ccaaagtttgtgaattactataattttatgaacatccttaagcagacctcgattaatttc
atgatttccgcaggtatgcttgttgttctgattaccgccggtatagatctttcggtaggt
tcgacaacggcgctggctacttgtatcatgggagttctggtaaaaagcggagtccataat
gtatgtattcttattgtatcggcaatggccgttgctattgcggtgggctatatcaatgga
atactcttgacgaagttacatctccctcatccctttgtttcaacattgggtacaaggagc
attgtacttggagttgccttattaataaccgatgccacgccaattggttttatcaataaa
gatgttgattcattattactccttggatcaaaaacaattttcggttttccgattagcttt
attgcagtcataatcgttgttgtgatctatcacatttttctgaacaagaccatgttgggc
cgtcagttatattgtgtcggcggtaatcccgaggcagcacgcctttccggtattaattct
gataaagttttaacaattgcatatacgatttccggtgccatgacgggaatagccggcatc
atcatggcgggaagagtctcaacggcgagtgccaccgccggtgcgacctttgatatggat
tccattgcttcctgtatcataggcggtgcctcttttatgggaggcaaaggtacgatattt
ggtgtgcttattggatcgctgcttatcagtacgataaggaatggcctgaacctgttaggt
gcacaaaatgatattcagtatattgtaattggtgccgtaatcatcgttgctgttttgatt
gatgtaacacgaggtcaaatggaacagcgtgcaagacggattgcccaagagaaagtgata
gaggaaagataa
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