Sediminispirochaeta smaragdinae: Spirs_3031
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Entry
Spirs_3031 CDS
T01287
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
ssm02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_3031
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Spirs_3031
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_3031
Transporters [BR:
ssm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Spirs_3031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
RSN1_TM
Motif
Other DBs
NCBI-ProteinID:
ADK82132
UniProt:
E1R4P4
LinkDB
All DBs
Position
complement(3247592..3248554)
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AA seq
320 aa
AA seq
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MKKTFLLLIIFTVLVSMPIFANGQNESKESQDESLQISVVLKALTSEYWNTVREGCEAAG
EKYGVAVTVVGPNSESEIAAQVTQIEEQVSTRPDALIIAPLEESAVIGASRPALDAGIPV
LALDTDFGLKGKTTFVGTSNKTAAQMGGEWLAKQLGSGKKVVLIAGQLGEVTSNMRMDGF
TAGLQAGGVEVLDVKSGNNTAEGSIKVMEDYLTRFRGEIDGVCTENDDEAIGTIEAIKQS
NDPNKDKIMVVGFNGDSGYLQLMDSGQINAAATVAQQPYLMGYLAVEAAVKTINGETVSP
IIDVPANLITKENLKDFLKE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacatttttgctactgattatttttacggttttggtgtcgatgcctatcttt
gcaaatgggcagaacgagtcaaaggaatctcaggatgaatcgctacagatttccgtagtt
ctaaaggcgcttacgagcgaatactggaatactgtgcgtgaagggtgcgaagccgccggg
gaaaagtatggtgttgcggtaacggtagtgggtcctaactctgagagcgagattgcggct
caggtgacccaaattgaagagcaggtttcgacacgtcccgatgctctcattatagcgcct
ctcgaggagagcgcggttatcggtgcttcccgtcctgcccttgacgccggtattccggta
cttgcattggatacggattttggtcttaagggaaaaacaacctttgtgggaacaagtaat
aaaactgcggctcagatgggtggtgaatggcttgccaaacaacttggttcggggaaaaag
gttgtcttaattgccgggcaattaggtgaagttacaagcaatatgcggatggatggattt
actgcaggtcttcaagcaggaggtgtcgaggttctggatgtaaagtctggtaataatact
gctgagggatcgatcaaagtgatggaggactatcttaccagatttaggggagagatcgat
ggtgtctgtaccgaaaacgacgatgaagccataggtacaattgaggcaattaagcagtca
aacgatcctaataaagacaagatcatggttgtcggatttaatggcgactcggggtatctg
caactgatggatagcggtcagatcaatgctgctgccactgttgcgcagcagccgtacctt
atgggatatcttgctgttgaggctgccgtaaaaacgataaacggtgaaactgtctctcct
attattgatgttcctgcaaacttgatcacaaaagaaaatctgaaggatttcttgaaagaa
tag
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