Sediminispirochaeta smaragdinae: Spirs_3255
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Entry
Spirs_3255 CDS
T01287
Name
(GenBank) arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00330
Arginine and proline metabolism
ssm01100
Metabolic pathways
ssm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Spirs_3255
Enzymes [BR:
ssm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
Spirs_3255
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
ADK82353
UniProt:
E1RAI5
LinkDB
All DBs
Position
complement(3493737..3495656)
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AA seq
639 aa
AA seq
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MDLKNGIRNWSTADAAEMYGIDNWGHGFFDLSEKGEVRVKLPWGGGEKRVSLLDIIDGIE
ARGYGLPVLLRFPDILGERIRTLNESFAKTMKQYEYRGAYRGVFPIKVNQQQQVIEEVVR
FGGAYHHGLEAGSKPELLIALGMVRDPETPIICNGYKDEEFVDLALYGVKMGLQVILVIE
QPGEISTIIRRSKKLGIEPTLGLRVKLSSTVGGKWAESAGDHSVFGLTAGQLVDAIEELS
RADMLGTLRLLHYHLGSQIPNIRDIRSAVHEASRYYTALVHEGAPMGYLDIGGGLGVDYD
GSRTTFVSSKNYSLDEYCSDVVDVIKMVMDEAGVEHPTVVTESGRATVAYYSVLLFNILD
VNSLHDKELPDAIPEEAPEALTNMLEAYKGISIKNLQESYHDIIYYRDELRNLFMVGNAS
LRDRSVGDSIFWLALDRIVQLSRKMRFIPDELQKVESMLADIYYGNFSLFQSVPDNWAID
QLFPIMPIHRLNEEPDRRGVLADITCDCDGKIDHFIDLYGMQEYLPLHSFSPESRYVIGT
FLVGAYQETLGDLHNLFGDTNIVSVALDEEGEIACTREVEGDSVSDVLSYVEYDPKRLIE
GFRHLAENAVRKKSITPYDRKEIMKAYIDGMQGYTYYEV
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggatcttaagaacggaatacgaaattggtcgacggctgatgccgccgaaatgtatgga
atcgacaattggggccacggtttctttgatctctcggaaaagggagaggtgcgtgttaaa
ctgccctggggcggcggtgaaaagcgtgtcagcctgcttgatatcatagacggcattgag
gctcgtgggtatggtttgcccgtcctccttcgttttcccgacattcttggggagcggatc
cgtaccctcaacgaatcatttgccaaaaccatgaagcagtacgaatatcgcggtgcctac
cgcggtgtttttcccatcaaggtgaatcagcagcagcaggttatcgaagaagttgttcgt
ttcggcggagcgtatcatcacggccttgaggctggaagtaagccggagcttctcattgct
ctggggatggttcgggaccctgaaacccctatcatctgtaatggatataaagacgaagag
tttgtcgaccttgccctttacggggtgaaaatgggtcttcaggtgattcttgtgattgaa
cagcccggggagatatccaccattatcaggcgttcgaaaaaacttgggattgaaccgacc
ttggggctgcgggtcaagctttcctccaccgtcggaggcaaatgggctgagtcggccggt
gatcattcggtgttcggcctcaccgcgggccagttggtcgacgcgattgaggaactatcc
cgggcggatatgcttggcaccctgcggctgcttcattatcacctcggaagtcaaatcccc
aatattcgcgacatcagaagtgcggttcatgaagcaagccgctattacaccgctttggta
catgagggggctcccatgggctacctggatatcggcggtggattaggggtcgattacgac
ggttctcgaaccacctttgtgagtagcaaaaactacagccttgatgagtactgttccgat
gttgtggatgtcattaaaatggtcatggatgaggccggtgtcgaacatccgacggtcgtt
accgaatcgggaagggcgaccgttgcctactattcggtcctgcttttcaatattctcgat
gtcaatagcctccacgacaaggaattgcccgatgccattccagaagaggctccggaggct
ttgacgaacatgcttgaggcctataagggtatcagcatcaagaaccttcaggagagctat
catgatatcatctattatcgtgatgagttgcgtaatctctttatggtaggcaatgcgagc
ctgagggacagaagtgtcggtgattcgattttctggctcgccctggatcggatcgtccag
ttgagcagaaagatgcgttttatcccggacgagcttcagaaggtggaatcgatgctggct
gatatctattacggcaatttcagtctctttcaaagcgtcccggataattgggccattgac
cagctttttcccattatgccgattcatcgactcaatgaagaacctgatcgccggggggta
cttgccgacatcacctgcgactgcgacggaaagatcgatcacttcattgatctttacggt
atgcaggagtatctgccgttgcacagcttttctcctgaatcccgatatgtcataggaacc
tttctcgttggggcctatcaggaaacccttggcgatctccataacctttttggtgacacg
aacattgtgagtgtggccttggacgaagagggtgaaattgcttgtacccgtgaggtcgaa
ggggattcggtctcggatgtgctgagctatgtagaatatgatcccaaacgactgatcgag
gggtttcgtcatcttgccgaaaatgcggtccgcaagaagtcgatcaccccttacgaccga
aaagagatcatgaaggcctacatcgacggcatgcagggctatacgtattacgaagtataa
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