Sediminispirochaeta smaragdinae: Spirs_3413
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Entry
Spirs_3413 CDS
T01287
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10537
L-arabinose transport system substrate-binding protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_3413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_3413
Transporters [BR:
ssm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
L-Arabinose transporter
Spirs_3413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
ADK82502
UniProt:
E1R2E2
LinkDB
All DBs
Position
complement(3670672..3671676)
Genome browser
AA seq
334 aa
AA seq
DB search
MFTEGRLSKKFLVWLVIFAAVALLLFYLFFEIAQDPKEKSDCHLAFLVKRTDMLWYRREV
DGFISACRDLGADPLILDNQMDHNRTLSNLSAAVNREVDGIALGTPDCRLGRLLVDQAFS
ADIPLISVDEKLTDMSGRQLAPHIGPDNLSLGTQGGYWMKRQLEARGWLGDYRRNVGFLL
LGSQRDAGIEQRLRAACLLTDPLFLPSGYYKRWSEEFDKSDLTGAILKMHAMLALYPEIT
NWVVFVGNNAGALGVYAALCQLDLAEDSLVCGLYPTSAPTAIPRENMVLAYGDGFAMGAK
AAGILYRHVTAGTPIPPNTEIPMNIGRALEEEHE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgttcacagaaggacgactgtcaaaaaagtttctcgtgtggctggttatttttgcagct
gttgccctccttctcttttatcttttcttcgagatcgctcaggatccgaaggaaaaatct
gactgccatcttgccttccttgtgaaacggacggacatgctctggtatcgtcgggaagtg
gacggattcatttccgcctgcagggaccttggtgcggacccgcttatcctcgacaatcaa
atggaccacaacagaactctgtcgaatttgagtgccgctgtcaacagagaggtggatgga
attgccttgggcactccggactgccggctcggccgccttttggtggaccaggccttttcg
gcagatatccccctgatctccgtcgacgaaaagctgacggatatgagtggacggcagttg
gcgcctcatattggtcccgacaatctttccctgggaacccagggcggatactggatgaaa
cggcagctggaagcccggggatggctgggggattatcgcaggaatgttggttttctgctt
ttaggctcacaacgagatgccggaatcgaacagcgacttcgggctgcctgcctcttgacc
gatcccctttttttaccttcaggctattacaagcgatggtcggaagagttcgataagagt
gatcttaccggcgcgatattgaagatgcatgccatgctggccttgtaccccgagattacg
aactgggtggtcttcgtcggcaacaacgctggggcattgggcgtatatgccgccctctgt
cagcttgatcttgccgaagactccctcgtctgcgggctttatcccacttccgctcctaca
gcgataccgcgggagaatatggtactggcctatggggacggttttgccatgggtgcaaag
gcagccgggatactctatcgccatgtgacggcgggtacccccatacccccgaacacggaa
attcccatgaatataggaagggctttggaggaagagcacgaatga
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integrated database retrieval system
