Sediminispirochaeta smaragdinae: Spirs_3421
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Entry
Spirs_3421 CDS
T01287
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K23508
galactofuranose transport system substrate-binding protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_3421
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_3421
Transporters [BR:
ssm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Galactofuranose transporter
Spirs_3421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Glyco_trans_1_4
HTH_pico_cyano
Motif
Other DBs
NCBI-ProteinID:
ADK82510
UniProt:
E1R2F0
LinkDB
All DBs
Position
complement(3680245..3681231)
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AA seq
328 aa
AA seq
DB search
MKRLLVFSLALMTIVGGFLFANGESEAPQADDGLIVVGYAQVGAESDWRTANTESFKSMF
TEANGYKLIFDDAQQKQENQIKAIRNFIQQDVDYIVVAPVVETGWETVLGEAKAAGIPVI
LSDRQMKLSDDSLYTAWVGGNFLKEGQDGVKWLNDYLKKNGRDQEDLNVVLLQGTIGSSA
QVGRTQGITEGLDANPHLHLLAKQTGEFTQAKGQEVMESFLKAYPDIDIVFAENDNMAFG
AIDAIKAVGKVPGKDIIIVSFDAVHEAFNKMIAGELNCAVECNPLHGPRVAEIIQKLEKG
QKVDKIQYVVEKVFDQENAAEVLPTRKY
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggctgctggttttttctttggccctaatgacaatcgttggtgggtttttattt
gcaaatggcgaatccgaggctcctcaggcggatgacgggcttatcgtggtaggttatgca
caggtcggcgccgaatcagattggaggacggcaaataccgaatccttcaaaagtatgttt
accgaagcgaacggctacaagctgatctttgatgacgcccagcagaagcaggagaatcag
atcaaggcgataagaaacttcatccaacaagatgtcgactacatcgttgtcgctccggtt
gtggaaaccggatgggaaacggtcctaggcgaggcaaaggccgccggaatccccgtaatt
ctctccgaccgtcagatgaagctctccgacgactccctctacaccgcctgggttggtgga
aacttccttaaggaagggcaggatggagtaaagtggctcaacgattatctgaagaagaat
ggacgcgaccaggaggatttgaacgtcgtactccttcagggaaccatcggttcttcggct
caggtaggacggacccagggcattaccgaaggtttggatgccaatccccatcttcatctc
cttgcaaaacagaccggtgaatttacccaggcgaaggggcaggaggttatggagtccttt
ctgaaggcctaccccgatatcgacatcgtctttgccgagaacgacaacatggccttcggc
gccattgatgccatcaaggctgtcggaaaggtcccgggcaaggatatcatcatcgtttcc
ttcgatgccgttcacgaggccttcaataagatgattgccggagagctcaactgtgccgtg
gaatgtaatcccctgcacggtccgagggtagcggagatcatccagaagctcgagaagggg
cagaaggtcgacaagatacagtacgtggtggaaaaggtgttcgatcaggagaatgccgcc
gaggtcctgcccactcgaaaatactga
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