Sediminispirochaeta smaragdinae: Spirs_3428
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Entry
Spirs_3428 CDS
T01287
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ssm
Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssm03000
]
Spirs_3428
Transcription factors [BR:
ssm03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Spirs_3428
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
LacI
HTH_Tnp_ISL3
HTH_3
TetR_N
HTH_7
Sigma70_r4_2
TnsD
Motif
Other DBs
NCBI-ProteinID:
ADK82517
UniProt:
E1R2F7
LinkDB
All DBs
Position
3688202..3689227
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AA seq
341 aa
AA seq
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MTIKDIAKQAGVSIGTVDRVLHNRGRVSVETARRIRAIVKESGYKPNMYASTLSSSRHYT
LAALTPRHDQDGGFWELPAKGLLRAETELEQFSIHVVRYEFDRYSEDSFRQEAERIIADR
PDGLIIAPVLPSPARRLIDALKGNIPYVLFDSNLPETTALAFIGQDSYCSGILAGKLMKL
LSPNPDTCVIIQSVIPDVHITGRINGFLSQYADDEKPPLVIEEHIEDRNVCTKFMDTLLS
QRPEVEGIFVTNASCHRVAEYLEQRFPQGSPIKVIGYDLIPPNKECLKRGYIDFIISQRP
ERQGFEAVYTLYRKLVLKREPSSRIVMPLDILTKENVDFYR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcaaagatattgcaaagcaggcaggcgtttcgatcggaacagtcgatcgcgtg
cttcataacaggggccgcgtatcggtagaaacagcaaggaggatcagggccattgttaag
gagtctggctacaaacccaatatgtatgccagcaccctttccagctccagacactatacc
ctcgccgcgcttactcctcgtcatgatcaggatgggggattctgggagcttccggcgaag
ggcctcctcagggccgagaccgagctcgaacaattctcgatacatgtagttcggtatgag
ttcgacagatacagcgaagactcgttcaggcaggaggcagaacgaattatcgcagatcgt
cccgacggtcttatcatcgcccctgttctcccaagccctgcccgccgtctcatcgacgca
ctgaaagggaacattccctacgtactcttcgactccaatctgccggagaccacggcactt
gcctttatcgggcaggactcctactgcagcggtattctcgcaggcaaactgatgaaactg
ctctctccgaatcctgatacgtgcgttattattcaatcggttatccctgatgtccatatc
acgggacgaatcaacggtttcctgagccaatatgccgatgatgaaaaaccgcctttggtg
atcgaagaacacatcgaagatcggaatgtttgtacaaagttcatggatactctccttagc
cagagaccggaggtggagggaatctttgtcacaaacgcttcctgtcatcgtgtggccgaa
taccttgagcaacgttttccgcaaggttctccgataaaggtaatcggttatgatctgatc
cccccaaacaaggaatgcctgaaaaggggctacatcgatttcatcatcagccagaggcct
gaaagacagggcttcgaagcggtctacaccctttacagaaagcttgtactaaaacgtgaa
ccttccagccggattgtcatgccgctggatattcttaccaaagaaaacgttgatttctat
cgatag
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