Sediminispirochaeta smaragdinae: Spirs_3441
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Entry
Spirs_3441 CDS
T01287
Name
(GenBank) transcriptional regulator, TetR family
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
ssm
Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssm03000
]
Spirs_3441
Transcription factors [BR:
ssm03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Spirs_3441
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_9
TetR_C_29
Mig-14
Motif
Other DBs
NCBI-ProteinID:
ADK82530
UniProt:
E1R2H0
LinkDB
All DBs
Position
3703528..3704172
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AA seq
214 aa
AA seq
DB search
MFTLSSDNEPSKEELILEAAMKVFIEKGWSGARMQEIADRAGINKTLLHYYFRSKENLYR
RILQQVLTFFFRQASINYDEADDFESFLRKAIAAIIDTANDNPQLPIFIMQELSRGGATV
REVLRDVVDREEMVLPELLMSRVSQALATGTIRRIDPIQFLLTLIGGCIYFFVAEPIAME
IIKKQDSVGAFDRAAFIEERKEEIFNVLYYGIKA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgttcacattatcttccgataacgagccgtcgaaagaggagctcatccttgaggcggcc
atgaaggttttcatcgaaaaaggatggagcggagcaagaatgcaggaaattgcagatcgg
gcgggaatcaataaaacccttctccactattatttccgttcaaaggaaaatctctacaga
cggattcttcagcaggtcctcacctttttctttcggcaggccagcatcaactacgatgag
gctgatgactttgagagctttctgaggaaggcgattgcggcaattatcgacacggcgaac
gacaacccacagttgcctatattcatcatgcaagaactttcccgtggtggcgcaacagtg
cgcgaggtgctgagggatgttgtcgaccgagaagagatggtcctacccgaattattgatg
tcgcgcgttagccaggcacttgcgaccggaacaatacgtcggatcgatcccattcaattc
cttctcaccctgattggaggctgtatctacttctttgttgccgagcctatcgccatggag
atcattaaaaaacaagatagcgtcggggcgttcgatcgggcggccttcatcgaagaacgc
aaggaggaaattttcaatgttctctactacggtatcaaggcgtaa
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