Sediminispirochaeta smaragdinae: Spirs_3477
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Entry
Spirs_3477 CDS
T01287
Name
(GenBank) ABC transporter related protein
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_3477
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_3477
Transporters [BR:
ssm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Spirs_3477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
DUF87
AAA_22
FtsK_SpoIIIE
RsgA_GTPase
AAA_18
AAA_16
MeaB
Hairy_orange
DUF4778
Motif
Other DBs
NCBI-ProteinID:
ADK82565
UniProt:
E1R2K5
LinkDB
All DBs
Position
3738605..3740350
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AA seq
581 aa
AA seq
DB search
MNSFKRILKFMRPYLPFAILGPLLMLLEVAMDLIQPRLMEKIVDIGLANFDYHYILKTGL
MMAAAAVVGVLGGAGCSFFSTLAGVGMGTDLRSRLYSHIQRLSTSDIDRLSTGSLVTRLT
NDIIQIQEISIMMLRILVRAPLQIIGSLIMAILISPRLSLILVLLIPLLLLSITIIMRRS
FPLFTQVQERIDGINTVTQEALSGVRVIKAFAREEFETERFAKANGTLVKTMEKAATMIA
WIHPVMILLLNGGIALALYFGGTLNTQGPLTTGELMAFLNYLMQLLMSLMMVSMVLIRFS
RGEASAKRIMEVFDTHPNLRNPAEPKHLSDPQGEILFDKVSFNYGKNEEERDILDSISFT
LQAGRTTGIIGTTGSGKSTLVHLLTRLYDVASGRILLDGVDIRELNQEDLRTLITVVPQQ
AMLFSGTIRENITFGKPEATDSQILEAAEVAQIRDFIDKNAEGLDTVLQQRGVNLSGGQK
QRLCIARALLPSPPVLILDDSTSALDAKTAYRLQQALCEKRSRMTTIIIAQRIASIREAD
SIIVLDDGAVVDMAPHEVLLQRCGLYRDIVRSQEGEGVLHV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattcaagcgtattctgaaattcatgcggccctacctcccctttgccattctc
gggccgcttttaatgctcctggaggtggccatggacctcatccagcccaggttgatggag
aaaatcgtcgatatcggtcttgccaatttcgactaccactacatcctgaagacgggtttg
atgatggcggctgcggccgtggtaggggtcctgggaggggcaggatgctcctttttttcc
acgcttgcaggagtgggcatgggtaccgatctgagaagcaggctctatagtcatattcag
aggctttccacctccgatatcgatcggctgagtaccggcagtctggtaacccgcctgaca
aacgatatcatccagattcaggaaatctcgattatgatgcttaggattcttgtcagggcg
ccgcttcagatcatcggaagcctcatcatggcaatactcatcagcccgcgcctttcgctc
atcctcgtactcctcattcccctgttgttgctgtcgatcacgataatcatgcgtcgatcc
tttcccctttttacccaggtacaagaacggatagacggaatcaacacggtcacccaggag
gcgctcagcggcgttcgggtcataaaggcctttgccagggaagagtttgagacggagcgc
ttcgccaaggcaaacggcacattggtaaagacgatggaaaaagcggctaccatgatcgcc
tggatacatcccgtcatgatccttttgctcaacggaggcattgcactggctctctacttc
ggcgggaccctcaatacccaggggcccctcaccacgggagagcttatggccttccttaat
tatcttatgcagcttttgatgtctctcatgatggtcagtatggtccttattcgtttttcc
cgaggagaggcttcggcaaagagaatcatggaagtcttcgacacacatcccaatcttcga
aacccggcagagccgaaacacctttctgatccacagggagaaatcctcttcgacaaggtc
tccttcaattacggaaagaacgaagaggaacgagatatcctcgatagcatcagcttcacc
ctacaggccggacgtaccaccggtatcatcgggactaccggctcggggaagtcgaccttg
gtccatctgctgacgagactctacgatgttgcttcgggaaggatactcctggacggggtc
gatatccgggagctcaaccaggaggatctccgcactctcatcaccgtggtaccccagcag
gcaatgcttttttccggtacgatccgtgaaaacatcaccttcggaaagccggaggccacc
gacagtcaaatcctcgaagcggcagaggttgcacagatacgagactttatcgataaaaat
gcagagggactggacaccgtgctgcagcagcggggagtcaatctttcagggggacagaaa
cagcgcctttgcatcgcacgggccctgctcccctcccctcctgttctgattctcgacgat
agtaccagtgcccttgatgcaaaaaccgcataccgtctgcagcaggccctttgcgaaaag
cggagcagaatgaccaccattatcattgcccagcgtatcgcgtcgatcagggaagcggac
tcgatcatcgtccttgacgacggtgcagtcgtcgatatggcgcctcacgaggtgttgctg
caacgctgcgggctttaccgcgatattgtacggtcccaggaaggagagggggtgctccat
gtctaa
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