Sediminispirochaeta smaragdinae: Spirs_3478
Help
Entry
Spirs_3478 CDS
T01287
Name
(GenBank) ABC transporter transmembrane region
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_3478
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_3478
Transporters [BR:
ssm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Spirs_3478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
AAA_21
ABC_membrane_2
AAA_23
AAA_16
DEAD
AAA_30
MMR_HSR1
RsgA_GTPase
AAA_28
AAA_29
TsaE
FtsK_SpoIIIE
Mg_chelatase
AAA_7
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ADK82566
UniProt:
E1R2K6
LinkDB
All DBs
Position
3740343..3742184
Genome browser
AA seq
613 aa
AA seq
DB search
MSKPKTTAPGVTALPGRGVGHGSAGMFKTEKAEVKNSRKTIRRFWDYMKAYKIRLLFVVF
LVLVASLQQMLTPWLISIAIDRYILPGDLSGLLRIVLIMGGLIAIVAAAGWLQQYMMIRI
SQDTLGTLRRQLFSHLQRLDLKYYDSHTHGELMSRFTNDIENISNAMSQVVTQFLSSVIA
ILGVLVMMFILNPPLAFVTLATVPLIFVVTKVIGKRTRESFKQQQRLLGTINGHIEESIT
GTTIIRLFRREAAEEKTLDSMNRELKHASTKAQVLAGLMGPLMNLTNNIRYAVVAAAGGV
FGIMGIASVGTIAAFLNYTRQFGRPISQIAQLYNSILSALAGAERVFEVLDQRPEIFSPD
NGAAPSALRGEVTFRHVNFCYVQGKPILKDINLHAAPGSNIALVGPTGAGKTTIINLLTR
FYDIGSGEILIDGKAIGEYDLTALRRNLGLVLQDTFLFRGTVMDNIRYGNMEADDDAVYA
AARSSRAHHFIRHLPEAYQTMLSEEGGNLSQGQRQLISIARALLANPSILILDEATSSVD
SRTEFLIQEGMSELMKGRTSFVIAHRLSTIRGADMILVLKEGTIVERGNHQELLKQNGFY
AGLHATHFETELR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcccaaaaccacggcaccaggggttaccgccctacccggccggggagtcggt
catggttccgcaggtatgttcaaaacagagaaagcagaggtgaaaaacagtcgtaaaacc
atccggcgcttctgggactatatgaaagcgtacaaaatacggctgctctttgtcgttttc
ctggtcctcgttgcttccctccagcaaatgctgacaccatggctgatcagcattgccatc
gatcgttacatccttcccggtgacctttcagggctgttgcgaatcgtccttatcatggga
ggcctaatcgccatcgttgccgcagcgggctggcttcaacaatatatgatgatcagaatc
agccaggataccttgggaacgcttcgccggcagctcttttctcacctccagcgtctcgat
ttgaaatattacgacagccacacccacggcgaactcatgagccgatttaccaatgatatc
gagaatatcagcaacgccatgtcacaggtggttacgcagtttctttccagtgttatcgcc
attctcggcgtgcttgtgatgatgttcatcctcaatcccccccttgccttcgtcaccctt
gcgaccgttcctttgatctttgtggtgacgaaagtaattggaaaaaggacaagggaaagc
ttcaaacagcagcaacgccttttgggtactatcaacggacatatagaagaaagcatcaca
ggaacgacgatcatacgcctcttcaggagggaggctgcggaagagaagacccttgattcg
atgaaccgtgagctgaaacacgcaagtaccaaggcccaggtcctggcgggactcatgggg
ccgctgatgaaccttaccaataatatccgatacgccgtcgttgccgcggcagggggtgtc
ttcggtatcatggggattgcgagcgtcggaaccatagcagcatttctcaattatacacgg
caattcggtcgccccataagccagatcgcccagctctacaactcgattctctcggccctc
gccggagccgaaagggtattcgaggttcttgatcagcgcccggaaatcttctcccccgac
aatggagcggcgccgtccgccttacgtggtgaggtcacattccggcatgtaaacttttgc
tacgtgcaaggaaagcctatactaaaggatatcaacctgcacgctgcaccgggtagtaat
atagcactggtgggacccacgggagcgggaaagacaacgattatcaacctcctcacccgg
ttttacgacataggcagcggagaaattctcatcgatggaaaagctattggagaatatgat
cttaccgctctgcgcagaaatctcggccttgttcttcaggacacatttctcttcagggga
acggtgatggataatatccgctacggtaatatggaggccgacgatgatgcggtatatgca
gcagcccgctcctccagggcccatcatttcattcgccatctgccggaagcctaccaaacc
atgctttccgaagagggaggaaacctcagccaggggcagcggcagctgatatccatcgcc
cgggccctccttgcaaacccttcgatccttatccttgacgaagcaaccagcagtgtcgat
tcccgcaccgaattccttatacaggaaggtatgtcggaactcatgaaggggcggacctcg
tttgtcattgcccaccgactttccaccattcgcggggccgatatgatcctggtgctgaag
gaaggaaccattgtcgaacggggaaatcatcaagagctgctaaagcaaaacggcttttat
gccggtctccatgctactcattttgaaacggaactgcgataa
DBGET
integrated database retrieval system
